RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.86□□□□□ -0.99
UBE4B-202ENST00000343090 USP21Q9UK80 565 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 CLEC11AQ9Y240 323 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 FHOD1Q9Y613 1164 aa8.86□□□□□ -0.99
UBE4B-202ENST00000343090 WDR17Q8IZU2 1322 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TMEM232C9JQI7 657 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 GNA14O95837 355 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 VPS41P49754 854 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 COA7Q96BR5 231 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 PAGE5Q96GU1 130 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 PICK1Q9NRD5 415 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 SPHKAPQ2M3C7 1700 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TADA3O75528 432 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 PPM1FP49593 454 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 CERKLQ49MI3 558 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 FAM102BQ5T8I3 360 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 SUSD4Q5VX71 490 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 MIER3Q7Z3K6 550 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 ANKRD42Q8N9B4 389 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 MSANTD4Q8NCY6 345 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TXNDC16Q9P2K2 825 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 PCDHA1Q9Y5I3 950 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 ABCA6Q8N139 1617 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 FERP16591 822 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 GUCY2DQ02846 1103 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 PABPC4Q13310 644 aaKnown RBP eCLIP8.85□□□□□ -0.995e-17■□□□□ 9.2
UBE4B-202ENST00000343090 DCUN1D2Q6PH85 259 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TBCKQ8TEA7 893 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 RPGRIP1Q96KN7 1286 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 UNC13BO14795 1591 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 QRICH2Q9H0J4 1663 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 RNF17Q9BXT8 1623 aaKnown RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 CHUKO15111 745 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 CD19P15391 556 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TNNI1P19237 187 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 CCZ1BP86790 482 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 FBXW10Q5XX13 1052 aa8.85□□□□□ -0.99
UBE4B-202ENST00000343090 SMCR8Q8TEV9 937 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 STRBPQ96SI9 672 aaKnown RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TRIM6Q9C030 488 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 SRPRBQ9Y5M8 271 aaKnown RBP8.85□□□□□ -0.99
UBE4B-202ENST00000343090 TESPA1A2RU30 521 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 KRT19P08727 400 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 C2orf54Q08AI8 447 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 LARP4BQ92615 738 aaKnown RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 P2RX5Q93086 422 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 VTI1AQ96AJ9 217 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 SWAP70Q9UH65 585 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 PPIP5K2O43314 1243 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 CYP27A1Q02318 531 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ICA1Q05084 483 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ZKSCAN8Q15776 578 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ZNF658Q5TYW1 1059 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 SLFN13Q68D06 897 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 DENND2CQ68D51 928 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 CACNA2D3Q8IZS8 1091 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 SREK1Q8WXA9 508 aaKnown RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 KRT12Q99456 494 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 CDC42BPBQ9Y5S2 1711 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 K7ENM7 598 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 MEIS1O00470 390 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ALAS1P13196 640 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 MRPS25P82663 173 aaKnown RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 DLGAP5Q15398 846 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 TRIM68Q6AZZ1 485 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 GALNT17Q6IS24 598 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 FBXO11Q86XK2 927 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ENOX1Q8TC92 643 aaKnown RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 OXER1Q8TDS5 423 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 CCDC127Q96BQ5 260 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 CYP2D6P10635 497 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ATP2B4P23634 1241 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ATP5DP30049 168 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 MECOMQ03112 1051 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 ACTN3Q08043 901 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-202ENST00000343090 TOGARAM2Q6ZUX3 1019 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 TRIM7Q9C029 511 aa8.84□□□□□ -0.99
UBE4B-202ENST00000343090 PNPLA6Q8IY17 1366 aa8.84□□□□□ -1
UBE4B-202ENST00000343090 CLTAP09496 248 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 TCP1P17987 556 aaKnown RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 RASA3Q14644 834 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 CAPN12Q6ZSI9 719 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 FAM178BQ8IXR5 827 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 TAB3Q8N5C8 712 aaPredicted RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 TMOD4Q9NZQ9 345 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 SRP68Q9UHB9 627 aaKnown RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 ALKQ9UM73 1620 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 MED14O60244 1454 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 NPHP4O75161 1426 aaPredicted RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 ZBED4O75132 1171 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 MOCS3O95396 460 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 TBC1D8O95759 1140 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms