RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NDUFAB1O14561 156 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 KCNK3O14649 394 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 CMA1P23946 247 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 SATB1Q01826 763 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 SNX25Q9H3E2 840 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 PDIA3P30101 505 aaKnown RBP16.42■□□□□ 0.22
UBE3B-202ENST00000342494 BPIFB4P59827 614 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 GRAPQ13588 217 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 TRIM58Q8NG06 486 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-202ENST00000342494 KMT5AQ9NQR1 393 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 PCDHA4Q9UN74 947 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 NT5C1BQ96P26 610 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 PHBP35232 272 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 MYL7Q01449 175 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 KRBA2Q6ZNG9 492 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 LAD1O00515 517 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 SYDE2Q5VT97 1194 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 MAP7D3Q8IWC1 876 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-202ENST00000342494 FAM149B1Q96BN6 582 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 VPS41P49754 854 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 MFAP3P55082 362 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 CLIC6Q96NY7 704 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 MAGEF1Q9HAY2 307 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-202ENST00000342494 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-202ENST00000342494 ARPP19P56211 112 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 ATP11AP98196 1134 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 KRT71Q3SY84 523 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 RINT1Q6NUQ1 792 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 PLEKHA4Q9H4M7 779 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
UBE3B-202ENST00000342494 SOS2Q07890 1332 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 LARP4BQ92615 738 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 RILPQ96NA2 401 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 GOLGA8CPA6NN73 597 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 KRIT1O00522 736 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 RNF26Q9BY78 433 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 ERBB3P21860 1342 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 H2AFZP0C0S5 128 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 GCFC2P16383 781 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 TSTA3Q13630 321 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 H2AFVQ71UI9 128 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 B4GALNT4Q76KP1 1039 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 PIGSQ96S52 555 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 SAR1BQ9Y6B6 198 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 C21orf2O43822 256 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 PPARDQ03181 441 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 BFSP1Q12934 665 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 TBC1D10BQ4KMP7 808 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 ANKRD20A3Q5VUR7 823 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 RYBPQ8N488 228 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 ARHGEF2Q92974 986 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 NUF2Q9BZD4 464 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 GAP43P17677 238 aa16.4■□□□□ 0.22
UBE3B-202ENST00000342494 IPO11Q9UI26 975 aaKnown RBP16.4■□□□□ 0.22
UBE3B-202ENST00000342494 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 BRD1O95696 1058 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 PTPROQ16827 1216 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 C2orf69Q8N8R5 385 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 RASGRP4Q8TDF6 673 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 PIGBQ92521 554 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 COA1Q9GZY4 146 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF335Q9H4Z2 1342 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-202ENST00000342494 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
UBE3B-202ENST00000342494 TRAPPC10P48553 1259 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 PPP4R1Q8TF05 950 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ACCSQ96QU6 501 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 KIF9Q9HAQ2 790 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ARHGEF37A1IGU5 675 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 BUB1O43683 1085 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ARHGAP24Q8N264 748 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF713Q8N859 430 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-202ENST00000342494 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 TLR7Q9NYK1 1049 aaKnown RBP16.39■□□□□ 0.21
UBE3B-202ENST00000342494 UGGT1Q9NYU2 1555 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 CFAP43Q8NDM7 1665 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 H7C0C1 242 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ADD2P35612 726 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 ATP5OP48047 213 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 PRPSAP1Q14558 356 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
UBE3B-202ENST00000342494 RAB3IPQ96QF0 476 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms