RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 SPTLC2O15270 562 aa15.85■□□□□ 0.13
PMS1-201ENST00000342075 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
PMS1-201ENST00000342075 MRPL12P52815 198 aaKnown RBP15.85■□□□□ 0.13
PMS1-201ENST00000342075 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.85■□□□□ 0.13
PMS1-201ENST00000342075 LIG1P18858 919 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 HOXA7P31268 230 aaPredicted RBP15.84■□□□□ 0.13
PMS1-201ENST00000342075 HTRA3P83110 453 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 Q3C1V9 767 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 GALNT17Q6IS24 598 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 NSMFQ6X4W1 530 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 ANO3Q9BYT9 981 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 GOLPH3LQ9H4A5 285 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 A0A0G2JMZ2 1700 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
PMS1-201ENST00000342075 PDHXO00330 501 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 SLC37A4O43826 429 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 CNMDO75829 334 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 PTGDRQ13258 359 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 SLC39A14Q15043 492 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
PMS1-201ENST00000342075 KRT25Q7Z3Z0 450 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 BICD2Q8TD16 824 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
PMS1-201ENST00000342075 TOMM70O94826 608 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 IL17AQ16552 155 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 LBX2Q6XYB7 198 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 CYP2W1Q8TAV3 490 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 RBPJLQ9UBG7 517 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 USP49Q70CQ1 688 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 FASTKD5Q7L8L6 764 aaKnown RBP15.83■□□□□ 0.12
PMS1-201ENST00000342075 NOL7Q9UMY1 257 aaKnown RBP15.83■□□□□ 0.12
PMS1-201ENST00000342075 MRPL11Q9Y3B7 192 aaKnown RBP15.83■□□□□ 0.12
PMS1-201ENST00000342075 ABCB11O95342 1321 aa15.83■□□□□ 0.12
PMS1-201ENST00000342075 IGF2BP3O00425 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
PMS1-201ENST00000342075 STAT3P40763 770 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 GTF2A2P52657 109 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 RPS6P62753 249 aaKnown RBP15.82■□□□□ 0.12
PMS1-201ENST00000342075 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
PMS1-201ENST00000342075 NEK8Q86SG6 692 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 IL31RAQ8NI17 732 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 ELP1O95163 1332 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 YEATS4O95619 227 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 CETPP11597 493 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 CYP4F22Q6NT55 531 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 CAVIN1Q6NZI2 390 aaKnown RBP15.82■□□□□ 0.12
PMS1-201ENST00000342075 TEX13BQ9BXU2 312 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 TLL2Q9Y6L7 1015 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 LCTP09848 1927 aa15.82■□□□□ 0.12
PMS1-201ENST00000342075 RBBP6Q7Z6E9 1792 aaKnown RBP15.82■□□□□ 0.12
PMS1-201ENST00000342075 A0A1B0GVL5 298 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 GCOM1H8Y6P7 765 aaPredicted RBP15.81■□□□□ 0.12
PMS1-201ENST00000342075 POLR2MP0CAP2 368 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 CDC25AP30304 524 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 UBE2HP62256 183 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 SPDYE3A6NKU9 549 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 FAM155AB1AL88 458 aaPredicted RBP15.81■□□□□ 0.12
PMS1-201ENST00000342075 ANKRD13CQ8N6S4 541 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 C4orf32Q8N8J7 132 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 FBXO2Q9UK22 296 aaPredicted RBP15.81■□□□□ 0.12
PMS1-201ENST00000342075 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
PMS1-201ENST00000342075 BAATQ14032 418 aaPredicted RBP15.81■□□□□ 0.12
PMS1-201ENST00000342075 SHC4Q6S5L8 630 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 SPATC1LQ9H0A9 340 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 TMEM63CQ9P1W3 806 aa15.81■□□□□ 0.12
PMS1-201ENST00000342075 VWA3AA6NCI4 1184 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 TMEM88BA6NKF7 163 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 NR1I2O75469 434 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 ARHGAP4P98171 946 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 NCAPG2Q86XI2 1143 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 KCNG4Q8TDN1 519 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 SMCR8Q8TEV9 937 aaPredicted RBP15.8■□□□□ 0.12
PMS1-201ENST00000342075 TAAR1Q96RJ0 339 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 MOV10L1Q9BXT6 1211 aaKnown RBP15.8■□□□□ 0.12
PMS1-201ENST00000342075 GOLGA6L4A6NEF3 574 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 FAM86B1E9PN63 330 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 FAM86B2P0C5J1 330 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 HSD17B4P51659 736 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 ATL3Q6DD88 541 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 CCAR1Q8IX12 1150 aaKnown RBP15.8■□□□□ 0.12
PMS1-201ENST00000342075 SYTL5Q8TDW5 730 aaPredicted RBP15.8■□□□□ 0.12
PMS1-201ENST00000342075 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 PORCNQ9H237 461 aa15.8■□□□□ 0.12
PMS1-201ENST00000342075 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
PMS1-201ENST00000342075 UNCXA6NJT0 531 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 PP2D1A8MPX8 630 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 PIK3CDO00329 1044 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 EIF2AK2P19525 551 aaKnown RBP15.79■□□□□ 0.12
PMS1-201ENST00000342075 CRYGNQ8WXF5 182 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 SLC10A3P09131 477 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 ATP2C1P98194 919 aaPredicted RBP15.79■□□□□ 0.12
PMS1-201ENST00000342075 FSTL1Q12841 308 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 WDR78Q5VTH9 848 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 RNF207Q6ZRF8 634 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 MYPNQ86TC9 1320 aa15.79■□□□□ 0.12
PMS1-201ENST00000342075 ERCC3P19447 782 aa15.78■□□□□ 0.12
PMS1-201ENST00000342075 OSBPP22059 807 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms