RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
UBE3B-201ENST00000340074 IL17RAQ96F46 866 aa17.66■□□□□ 0.42
UBE3B-201ENST00000340074 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
UBE3B-201ENST00000340074 SEC63Q9UGP8 760 aaKnown RBP17.66■□□□□ 0.42
UBE3B-201ENST00000340074 KIAA1217Q5T5P2 1943 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 OPLAHO14841 1288 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 RGS19P49795 217 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 EVCP57679 992 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 ARMCX2Q7L311 632 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 CRISPLD2Q9H0B8 497 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 DDX49Q9Y6V7 483 aaKnown RBP17.65■□□□□ 0.42
UBE3B-201ENST00000340074 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 CNTNAP5Q8WYK1 1306 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 NID2Q14112 1375 aa17.65■□□□□ 0.42
UBE3B-201ENST00000340074 ADD1P35611 737 aaKnown RBP17.64■□□□□ 0.42
UBE3B-201ENST00000340074 FUT2Q10981 343 aa17.64■□□□□ 0.42
UBE3B-201ENST00000340074 TRAF1Q13077 416 aa17.64■□□□□ 0.42
UBE3B-201ENST00000340074 PPP2R5BQ15173 497 aa17.64■□□□□ 0.42
UBE3B-201ENST00000340074 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.64■□□□□ 0.42
UBE3B-201ENST00000340074 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.42
UBE3B-201ENST00000340074 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.41
UBE3B-201ENST00000340074 CFBP00751 764 aa17.64■□□□□ 0.41
UBE3B-201ENST00000340074 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
UBE3B-201ENST00000340074 ZNF865P0CJ78 1059 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-201ENST00000340074 PDIA3P30101 505 aaKnown RBP17.64■□□□□ 0.41
UBE3B-201ENST00000340074 ALDH5A1P51649 535 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-201ENST00000340074 LHX8Q68G74 356 aa17.64■□□□□ 0.41
UBE3B-201ENST00000340074 COL20A1Q9P218 1284 aa17.64■□□□□ 0.41
UBE3B-201ENST00000340074 DDX20Q9UHI6 824 aaKnown RBP17.64■□□□□ 0.41
UBE3B-201ENST00000340074 NRBP1Q9UHY1 535 aa17.64■□□□□ 0.41
UBE3B-201ENST00000340074 CNPY2Q9Y2B0 182 aa17.64■□□□□ 0.41
UBE3B-201ENST00000340074 ASB14A6NK59 587 aa17.63■□□□□ 0.41
UBE3B-201ENST00000340074 SEPT4O43236 478 aa17.63■□□□□ 0.41
UBE3B-201ENST00000340074 ANO1Q5XXA6 986 aa17.63■□□□□ 0.41
UBE3B-201ENST00000340074 SYTL5Q8TDW5 730 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-201ENST00000340074 MAF1Q9H063 256 aa17.63■□□□□ 0.41
UBE3B-201ENST00000340074 ABHD16BQ9H3Z7 469 aa17.63■□□□□ 0.41
UBE3B-201ENST00000340074 MSCO60682 206 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 HSD17B4P51659 736 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 CCT2P78371 535 aaKnown RBP17.62■□□□□ 0.41
UBE3B-201ENST00000340074 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 DNERQ8NFT8 737 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-201ENST00000340074 C22orf23Q9BZE7 217 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 KATNBL1Q9H079 304 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-201ENST00000340074 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
UBE3B-201ENST00000340074 ZHX1Q9UKY1 873 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-201ENST00000340074 OGDHLQ9ULD0 1010 aa17.62■□□□□ 0.41
UBE3B-201ENST00000340074 V9GY48 417 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-201ENST00000340074 HOXA13P31271 388 aaPredicted RBP17.61■□□□□ 0.41
UBE3B-201ENST00000340074 NEK4P51957 841 aa17.61■□□□□ 0.41
UBE3B-201ENST00000340074 AK2P54819 239 aa17.61■□□□□ 0.41
UBE3B-201ENST00000340074 GHRHRQ02643 423 aa17.61■□□□□ 0.41
UBE3B-201ENST00000340074 MORC4Q8TE76 937 aa17.61■□□□□ 0.41
UBE3B-201ENST00000340074 TAAR1Q96RJ0 339 aa17.61■□□□□ 0.41
UBE3B-201ENST00000340074 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
UBE3B-201ENST00000340074 CAPN2P17655 700 aa17.6■□□□□ 0.41
UBE3B-201ENST00000340074 STK3Q13188 491 aa17.6■□□□□ 0.41
UBE3B-201ENST00000340074 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
UBE3B-201ENST00000340074 NTRK3Q16288 839 aa17.6■□□□□ 0.41
UBE3B-201ENST00000340074 EEPD1Q7L9B9 569 aa17.6■□□□□ 0.41
UBE3B-201ENST00000340074 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
UBE3B-201ENST00000340074 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
UBE3B-201ENST00000340074 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
UBE3B-201ENST00000340074 MYH7BA7E2Y1 1941 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-201ENST00000340074 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 AKR1A1P14550 325 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 CCDC144BQ3MJ40 725 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 FBXO16Q8IX29 292 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-201ENST00000340074 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 PHKBQ93100 1093 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 RMDN3Q96TC7 470 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 KIF2CQ99661 725 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
UBE3B-201ENST00000340074 ALPK3Q96L96 1907 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 PPFIA3O75145 1194 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 FARP2O94887 1054 aaPredicted RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 EDNRBP24530 442 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 RBM25P49756 843 aaKnown RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 PDE4DQ08499 809 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 ANKRD1Q15327 319 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 ARHGEF16Q5VV41 709 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 WWC2Q6AWC2 1192 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 ANKLE1Q8NAG6 615 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 LENG1Q96BZ8 264 aaPredicted RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 MPHOSPH6Q99547 160 aaKnown RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.41
UBE3B-201ENST00000340074 FAM184BQ9ULE4 1060 aa17.58■□□□□ 0.41
UBE3B-201ENST00000340074 ADCY6O43306 1168 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 RARBP10826 455 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 MLLT1Q03111 559 aaPredicted RBP17.57■□□□□ 0.4
UBE3B-201ENST00000340074 TAPT1Q6NXT6 567 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 USP17L6PQ6QN14 398 aa17.57■□□□□ 0.4
UBE3B-201ENST00000340074 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms