RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 IRX3P78415 501 aaPredicted RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.98
TMC1-202ENST00000340019 MUM1L1Q5H9M0 696 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 NEK8Q86SG6 692 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 TEX13BQ9BXU2 312 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 CCL15-CCL14A0A0B4J2E2 113 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 GCOM1H8Y6P7 765 aaPredicted RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 TRAK2O60296 914 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 FOSP01100 380 aaPredicted RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 POLR2MP0CAP2 368 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 ALAS1P13196 640 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 ATP2B1P20020 1258 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 HOXA13P31271 388 aaPredicted RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 MKRN3Q13064 507 aaKnown RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 CCL15Q16663 113 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 SNRNP48Q6IEG0 339 aaKnown RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 C4orf32Q8N8J7 132 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 ANO3Q9BYT9 981 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 MAP3K20Q9NYL2 800 aaKnown RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 PCDHA7Q9UN72 937 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 CEP131Q9UPN4 1083 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 CTDP1Q9Y5B0 961 aaPredicted RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 BTBD19C9JJ37 291 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 CNMDO75829 334 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 BMP15O95972 392 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 CFBP00751 764 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 OSBPP22059 807 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ATP2C1P98194 919 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 ZNF174Q15697 407 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 SKOR2Q2VWA4 1001 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 AXDND1Q5T1B0 1012 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 RGMBQ6NW40 437 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ANKRD23Q86SG2 305 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 MCF2L2Q86YR7 1114 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 SAMD3Q8N6K7 520 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 TRERF1Q96PN7 1200 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 STAT3P40763 770 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ME1P48163 572 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ZNF157P51786 506 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 FSTL1Q12841 308 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ORC2Q13416 577 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 KLHL40Q2TBA0 621 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 TKFCQ3LXA3 575 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ADALQ6DHV7 355 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 ZNF784Q8NCA9 323 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 PTPN18Q99952 460 aa8.92□□□□□ -0.98
TMC1-202ENST00000340019 FBXO2Q9UK22 296 aaPredicted RBP8.92□□□□□ -0.98
TMC1-202ENST00000340019 SPDYE3A6NKU9 549 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 FAM155AB1AL88 458 aaPredicted RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 PDHXO00330 501 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 SLC10A3P09131 477 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 PTPREP23469 700 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 MARCKSP29966 332 aaPredicted RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 MCM7P33993 719 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 SREBF1P36956 1147 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 USP11P51784 963 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 PTGDRQ13258 359 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 LETM2Q2VYF4 491 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 PPP4R3AQ6IN85 833 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 HHIPL1Q96JK4 782 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 MAF1Q9H063 256 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 HOMER2Q9NSB8 354 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 RNF146Q9NTX7 359 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 COL20A1Q9P218 1284 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 RBPJLQ9UBG7 517 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 PNMA3Q9UL41 463 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 MRVI1Q9Y6F6 885 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 DDX49Q9Y6V7 483 aaKnown RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 LCTP09848 1927 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 A0A1W2PQ27 194 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 A0A1W2PQ64 194 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 A0A1W2PQD8 194 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 TMEM88BA6NKF7 163 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 CCNT1O60563 726 aaKnown RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 PEX10O60683 326 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 MBD3O95983 291 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 RIOX2Q8IUF8 465 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 JMYQ8N9B5 988 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 SPATC1LQ9H0A9 340 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 TXNRD2Q9NNW7 524 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 SRPRBQ9Y5M8 271 aaKnown RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 CYP3A7-CYP3A51PA0A087WV96 503 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 CYP2C8P10632 490 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 CYP3A7P24462 503 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 YY1P25490 414 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 RPS6P62753 249 aaKnown RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 MOXD1Q6UVY6 613 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 SYTL5Q8TDW5 730 aaPredicted RBP8.91□□□□□ -0.98
TMC1-202ENST00000340019 MBOAT7Q96N66 472 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 RABGAP1Q9Y3P9 1069 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 FRMPD4Q14CM0 1322 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 RPTORQ8N122 1335 aa8.91□□□□□ -0.98
TMC1-202ENST00000340019 LAD1O00515 517 aa8.9□□□□□ -0.98
TMC1-202ENST00000340019 TDP2O95551 362 aa8.9□□□□□ -0.98
TMC1-202ENST00000340019 CYP3A4P08684 503 aa8.9□□□□□ -0.98
TMC1-202ENST00000340019 ARHGAP4P98171 946 aa8.9□□□□□ -0.98
TMC1-202ENST00000340019 GRIN1Q05586 938 aa8.9□□□□□ -0.98
TMC1-202ENST00000340019 PLS1Q14651 629 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms