RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 INIPQ9NRY2 104 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 ZNF180Q9UJW8 692 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 ADGRB3O60242 1522 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 CARMIL3Q8ND23 1372 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 SMIM23A6NLE4 172 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 E2F6O75461 281 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 GLRX3O76003 335 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 ADAMTS2O95450 1211 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 UBTFL1P0CB47 393 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 RARAP10276 462 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 CMA1P23946 247 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 IMMTQ16891 758 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 SLC15A3Q8IY34 581 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 KLHL29Q96CT2 875 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 FSD1Q9BTV5 496 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 INCENPQ9NQS7 918 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 ARHGEF38Q9NXL2 777 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 MYH15Q9Y2K3 1946 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 C5orf60A6NFR6 353 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 CTNND1O60716 968 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 FDPSP14324 419 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 MAGOHP61326 146 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 CYP26C1Q6V0L0 522 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 SYNE3Q6ZMZ3 975 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 TMTC1Q8IUR5 882 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 TEX9Q8N6V9 391 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 MAGOHBQ96A72 148 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 BOLA2Q9H3K6 86 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 NEURL4Q96JN8 1562 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 MAGEA13PA6NCF6 341 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 TRIM43BA6NCK2 446 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 HEXIM1O94992 359 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 PYGMP11217 842 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 MSH2P43246 934 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 VAV2P52735 878 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 CDC37Q16543 378 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 SMUG1Q53HV7 270 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 STOX1Q6ZVD7 989 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 NCCRP1Q6ZVX7 275 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 CNGA4Q8IV77 575 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 CAVIN3Q969G5 261 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 DNAJC1Q96KC8 554 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 AIFM3Q96NN9 605 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 DDX23Q9BUQ8 820 aaKnown RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 OXCT2Q9BYC2 517 aaPredicted RBP10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 TMBIM4Q9HC24 238 aa10.62□□□□□ -0.71
PTCHD4-201ENST00000339488 ITIH6Q6UXX5 1313 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 CYP1A1P04798 512 aaPredicted RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 VIMP08670 466 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 IFNAR2P48551 515 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 GRIN1Q05586 938 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TMED1Q13445 227 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 SUPT20HQ8NEM7 779 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 RNF25Q96BH1 459 aaPredicted RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TRIM11Q96F44 468 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 IFT43Q96FT9 208 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 XPO6Q96QU8 1125 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 MLXIPQ9HAP2 919 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TAB2Q9NYJ8 693 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TDRKHQ9Y2W6 561 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 CAPN6Q9Y6Q1 641 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 GCOM1H8Y6P7 765 aaPredicted RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 CETN3O15182 167 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 LDHAP00338 332 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 MYZAPP0CAP1 466 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 RASIP1Q5U651 963 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TRPM8Q7Z2W7 1104 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 LRRC34Q8IZ02 419 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 USP44Q9H0E7 712 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 BARX2Q9UMQ3 279 aaPredicted RBP10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 HYOU1Q9Y4L1 999 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 PTPRMP28827 1452 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 TNRQ92752 1358 aa10.61□□□□□ -0.71
PTCHD4-201ENST00000339488 IFT172Q9UG01 1749 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 HIP1RO75146 1068 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 UBTFL6P0CB48 400 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ATP11AP98196 1134 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 RCN2Q14257 317 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 HLTFQ14527 1009 aaKnown RBP eCLIP10.6□□□□□ -0.711e-6■■□□□ 13.8
PTCHD4-201ENST00000339488 CNPY1Q3B7I2 92 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 RUFY4Q6ZNE9 571 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 NBPF15Q8N660 670 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ATP11CQ8NB49 1132 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms