RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CCNE1P24864 410 aa15.06■□□□□ 0
RTN4-202ENST00000337526 ALDH1B1P30837 517 aa15.06■□□□□ 0
RTN4-202ENST00000337526 MAP2K2P36507 400 aa15.06■□□□□ 0
RTN4-202ENST00000337526 ICA1Q05084 483 aa15.06■□□□□ 0
RTN4-202ENST00000337526 CCDC38Q502W7 563 aa15.06■□□□□ 0
RTN4-202ENST00000337526 CASC4Q6P4E1 433 aa15.06■□□□□ 0
RTN4-202ENST00000337526 KIAA0825Q8IV33 1275 aa15.06■□□□□ 0
RTN4-202ENST00000337526 TBCKQ8TEA7 893 aa15.06■□□□□ 0
RTN4-202ENST00000337526 PAGE5Q96GU1 130 aa15.06■□□□□ 0
RTN4-202ENST00000337526 ABCC12Q96J65 1359 aa15.06■□□□□ 0
RTN4-202ENST00000337526 CXCR5P32302 372 aa15.06■□□□□ 0
RTN4-202ENST00000337526 GEN1Q17RS7 908 aa15.06■□□□□ 0
RTN4-202ENST00000337526 H7C1W4 665 aa15.05■□□□□ 0
RTN4-202ENST00000337526 STK10O94804 968 aaKnown RBP15.05■□□□□ 0
RTN4-202ENST00000337526 FOSP01100 380 aaPredicted RBP15.05■□□□□ 0
RTN4-202ENST00000337526 CRKLP46109 303 aaKnown RBP15.05■□□□□ 0
RTN4-202ENST00000337526 SLFNL1Q499Z3 407 aa15.05■□□□□ 0
RTN4-202ENST00000337526 ODR4Q5SWX8 454 aa15.05■□□□□ 0
RTN4-202ENST00000337526 FAM102BQ5T8I3 360 aa15.05■□□□□ 0
RTN4-202ENST00000337526 PLA2G4DQ86XP0 818 aa15.05■□□□□ 0
RTN4-202ENST00000337526 CCDC170Q8IYT3 715 aa15.05■□□□□ 0
RTN4-202ENST00000337526 TACO1Q9BSH4 297 aaKnown RBP15.05■□□□□ 0
RTN4-202ENST00000337526 CARD10Q9BWT7 1032 aa15.05■□□□□ 0
RTN4-202ENST00000337526 JRKLQ9Y4A0 524 aa15.05■□□□□ 0
RTN4-202ENST00000337526 ADCY10Q96PN6 1610 aa15.05■□□□□ 0
RTN4-202ENST00000337526 TESPA1A2RU30 521 aaPredicted RBP15.05■□□□□ 0
RTN4-202ENST00000337526 POLR2MP0CAP2 368 aa15.05■□□□□ 0
RTN4-202ENST00000337526 PNMA6AP0CW24 399 aaPredicted RBP15.05■□□□□ 0
RTN4-202ENST00000337526 PPP2R5DQ14738 602 aa15.05■□□□□ 0
RTN4-202ENST00000337526 GPATCH4Q5T3I0 446 aaKnown RBP15.05■□□□□ 0
RTN4-202ENST00000337526 KIF2CQ99661 725 aa15.05■□□□□ 0
RTN4-202ENST00000337526 ST7Q9NRC1 585 aa15.05■□□□□ 0
RTN4-202ENST00000337526 RABGAP1Q9Y3P9 1069 aa15.05■□□□□ 0
RTN4-202ENST00000337526 ARMCX5Q6P1M9 558 aa15.05■□□□□ -0
RTN4-202ENST00000337526 EXOC4Q96A65 974 aa15.05■□□□□ -0
RTN4-202ENST00000337526 PIH1D3Q9NQM4 214 aaKnown RBP15.05■□□□□ -0
RTN4-202ENST00000337526 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ -0
RTN4-202ENST00000337526 PLEKHG1Q9ULL1 1385 aa15.05■□□□□ -0
RTN4-202ENST00000337526 THAP12O43422 761 aa15.05■□□□□ -0
RTN4-202ENST00000337526 TROVE2P10155 538 aaKnown RBP eCLIP15.05■□□□□ -0
RTN4-202ENST00000337526 XKR9Q5GH70 373 aa15.05■□□□□ -0
RTN4-202ENST00000337526 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
RTN4-202ENST00000337526 SMCR8Q8TEV9 937 aaPredicted RBP15.05■□□□□ -0
RTN4-202ENST00000337526 MAGOHBQ96A72 148 aaKnown RBP15.05■□□□□ -0
RTN4-202ENST00000337526 STRBPQ96SI9 672 aaKnown RBP15.05■□□□□ -0
RTN4-202ENST00000337526 C1orf112Q9NSG2 853 aa15.05■□□□□ -0
RTN4-202ENST00000337526 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
RTN4-202ENST00000337526 MRPL11Q9Y3B7 192 aaKnown RBP15.05■□□□□ -0
RTN4-202ENST00000337526 DEPTORQ8TB45 409 aa15.04■□□□□ -0
RTN4-202ENST00000337526 GRK7Q8WTQ7 553 aa15.04■□□□□ -0
RTN4-202ENST00000337526 RNF34Q969K3 372 aa15.04■□□□□ -0
RTN4-202ENST00000337526 AMNQ9BXJ7 453 aa15.04■□□□□ -0
RTN4-202ENST00000337526 VCX3BQ9H321 246 aa15.04■□□□□ -0
RTN4-202ENST00000337526 CYP2D7A0A087X1C5 515 aa15.04■□□□□ -0
RTN4-202ENST00000337526 TMEM232C9JQI7 657 aa15.04■□□□□ -0
RTN4-202ENST00000337526 DLATP10515 647 aaKnown RBP15.04■□□□□ -0
RTN4-202ENST00000337526 PTPREP23469 700 aa15.04■□□□□ -0
RTN4-202ENST00000337526 PALM2Q8IXS6 379 aa15.04■□□□□ -0
RTN4-202ENST00000337526 RRP15Q9Y3B9 282 aaKnown RBP15.04■□□□□ -0
RTN4-202ENST00000337526 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
RTN4-202ENST00000337526 ALAS1P13196 640 aa15.04■□□□□ -0
RTN4-202ENST00000337526 RASGRF1Q13972 1273 aa15.04■□□□□ -0
RTN4-202ENST00000337526 RNF10Q8N5U6 811 aaKnown RBP15.04■□□□□ -0
RTN4-202ENST00000337526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.04■□□□□ -0
RTN4-202ENST00000337526 STK17AQ9UEE5 414 aa15.04■□□□□ -0
RTN4-202ENST00000337526 CASP8Q14790 479 aa15.04■□□□□ -0
RTN4-202ENST00000337526 TTLL11Q8NHH1 800 aa15.04■□□□□ -0
RTN4-202ENST00000337526 RSAD2Q8WXG1 361 aa15.04■□□□□ -0
RTN4-202ENST00000337526 RNF14Q9UBS8 474 aa15.04■□□□□ -0
RTN4-202ENST00000337526 HEG1Q9ULI3 1381 aa15.03■□□□□ -0
RTN4-202ENST00000337526 HECW2Q9P2P5 1572 aa15.03■□□□□ -0
RTN4-202ENST00000337526 HIP1RO75146 1068 aa15.03■□□□□ -0
RTN4-202ENST00000337526 ATF7P17544 494 aaPredicted RBP15.03■□□□□ -0
RTN4-202ENST00000337526 EIF4A3P38919 411 aaKnown RBP15.03■□□□□ -0
RTN4-202ENST00000337526 PDE6CP51160 858 aa15.03■□□□□ -0
RTN4-202ENST00000337526 MESDQ14696 234 aa15.03■□□□□ -0
RTN4-202ENST00000337526 KRT31Q15323 416 aa15.03■□□□□ -0
RTN4-202ENST00000337526 ASPRV1Q53RT3 343 aa15.03■□□□□ -0
RTN4-202ENST00000337526 CCDC13Q8IYE1 715 aa15.03■□□□□ -0
RTN4-202ENST00000337526 RILPQ96NA2 401 aa15.03■□□□□ -0
RTN4-202ENST00000337526 NHEJ1Q9H9Q4 299 aaPredicted RBP15.03■□□□□ -0
RTN4-202ENST00000337526 TPD52P55327 224 aaPredicted RBP15.03■□□□□ -0
RTN4-202ENST00000337526 MRPS9P82933 396 aaKnown RBP15.03■□□□□ -0
RTN4-202ENST00000337526 CCDC17Q96LX7 622 aa15.03■□□□□ -0
RTN4-202ENST00000337526 TYW1Q9NV66 732 aaKnown RBP15.03■□□□□ -0
RTN4-202ENST00000337526 RAB20Q9NX57 234 aa15.03■□□□□ -0
RTN4-202ENST00000337526 CLTAP09496 248 aa15.03■□□□□ -0
RTN4-202ENST00000337526 LMNB1P20700 586 aa15.03■□□□□ -0
RTN4-202ENST00000337526 IFNAR2P48551 515 aa15.03■□□□□ -0
RTN4-202ENST00000337526 IFT88Q13099 833 aa15.03■□□□□ -0
RTN4-202ENST00000337526 CAPN12Q6ZSI9 719 aa15.03■□□□□ -0
RTN4-202ENST00000337526 FMR1NBQ8N0W7 255 aaPredicted RBP15.03■□□□□ -0
RTN4-202ENST00000337526 MICAL1Q8TDZ2 1067 aa15.03■□□□□ -0
RTN4-202ENST00000337526 TRIM6Q9C030 488 aaPredicted RBP15.03■□□□□ -0
RTN4-202ENST00000337526 ODF2LQ9ULJ1 636 aa15.03■□□□□ -0
RTN4-202ENST00000337526 POLD1P28340 1107 aa15.03■□□□□ -0
RTN4-202ENST00000337526 LIG4P49917 911 aa15.03■□□□□ -0
RTN4-202ENST00000337526 DOK7Q18PE1 504 aa15.03■□□□□ -0
RTN4-202ENST00000337526 RESP18Q5W5W9 173 aa15.03■□□□□ -0
RTN4-202ENST00000337526 INTS9Q9NV88 658 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms