RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 PNOCQ13519 176 aa12.42□□□□□ -0.42
POLR1B-202ENST00000333990 ASIC2Q16515 512 aa12.42□□□□□ -0.42
POLR1B-202ENST00000333990 ODR4Q5SWX8 454 aa12.42□□□□□ -0.42
POLR1B-202ENST00000333990 XPOTO43592 962 aaKnown RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 LMNB1P20700 586 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 FAM193AP78312 1265 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 NR5A1Q13285 461 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 SMC1AQ14683 1233 aaKnown RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 LEKR1Q6ZMV7 388 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 LPAR1Q92633 364 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 DNAI1Q9UI46 699 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 CTAGE15A4D2H0 777 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 PALM3A6NDB9 673 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 LPXNO60711 386 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 CTAGE8P0CG41 777 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 CTAGE6Q86UF2 777 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 CTAGE4Q8IX94 777 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 PXDNQ92626 1479 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 PLEKHA8P1O95397 391 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 RPN1P04843 607 aaKnown RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 PSAPP07602 524 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 SRGNP10124 158 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 EIF2AK2P19525 551 aaKnown RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 LMAN1P49257 510 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 UBXN2AP68543 259 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 PNMA8AQ86V59 439 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 ALDH8A1Q9H2A2 487 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 ZKSCAN5Q9Y2L8 839 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 FLT1P17948 1338 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 C19orf81C9J6K1 198 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 KRT19P08727 400 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 ARMCX5Q6P1M9 558 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 TMTC1Q8IUR5 882 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 LINC00301Q8NCQ3 95 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 NSUN6Q8TEA1 469 aaKnown RBP12.41□□□□□ -0.42
POLR1B-202ENST00000333990 CSRNP2Q9H175 543 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 GINM1Q9NU53 330 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 TAB2Q9NYJ8 693 aa12.41□□□□□ -0.42
POLR1B-202ENST00000333990 KRT9P35527 623 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 CYP26C1Q6V0L0 522 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 CLIC6Q96NY7 704 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 LY9Q9HBG7 655 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 TNNC2P02585 160 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 KARSQ15046 597 aaKnown RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 STXBP2Q15833 593 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 ZNF354CQ86Y25 554 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 TMX1Q9H3N1 280 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 ZNF609O15014 1411 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 GPR75-ASB3A0A0A6YYF3 556 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 CD19P15391 556 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 HOXD10P28358 340 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 BBXQ8WY36 941 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-202ENST00000333990 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 RMDN3Q96TC7 470 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 GUCA1BQ9UMX6 200 aa12.4□□□□□ -0.42
POLR1B-202ENST00000333990 PSMD14O00487 310 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 AKR1B1P15121 316 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 PPP4CP60510 307 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
POLR1B-202ENST00000333990 NOLC1Q14978 699 aaKnown RBP eCLIP12.39□□□□□ -0.43
POLR1B-202ENST00000333990 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 CEP170P1Q96L14 293 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 SRPRBQ9Y5M8 271 aaKnown RBP12.39□□□□□ -0.43
POLR1B-202ENST00000333990 MYO5BQ9ULV0 1848 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 SLFN14P0C7P3 912 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-202ENST00000333990 CYP2J2P51589 502 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 TOB2Q14106 344 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-202ENST00000333990 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 NDUFA8P51970 172 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 PLCB3Q01970 1234 aa12.39□□□□□ -0.43
POLR1B-202ENST00000333990 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms