RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 ANP32DO95626 131 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
LIMK2-202ENST00000333611 EVX2Q03828 476 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 KIAA0825Q8IV33 1275 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC50Q8IVM0 306 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
LIMK2-202ENST00000333611 EPN1Q9Y6I3 576 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-202ENST00000333611 FAM170AA1A519 330 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 AGPSO00116 658 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
LIMK2-202ENST00000333611 DDR1Q08345 913 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC63Q8NA47 563 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 PIGBQ92521 554 aa13.11□□□□□ -0.31
LIMK2-202ENST00000333611 MAGEB6P1A0A0J9YX57 407 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 LRRC1Q9BTT6 524 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 DMGDHQ9UI17 866 aaKnown RBP13.1□□□□□ -0.31
LIMK2-202ENST00000333611 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 WDR19Q8NEZ3 1342 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 EVI5O60447 810 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 PDE8AO60658 829 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 CSF1RP07333 972 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
LIMK2-202ENST00000333611 KIF5BP33176 963 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 SCNN1BP51168 640 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 HVCN1Q96D96 273 aa13.1□□□□□ -0.31
LIMK2-202ENST00000333611 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TTC26A0AVF1 554 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 PPP1R37O75864 691 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 LRRC23Q53EV4 343 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 MYCBPAPQ8TBZ2 947 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 NAA15Q9BXJ9 866 aaKnown RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 FAM184BQ9ULE4 1060 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TTMPQ5BVD1 217 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 CCNI2Q6ZMN8 369 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TSEN2Q8NCE0 465 aaKnown RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 NFU1Q9UMS0 254 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TLDC2A0PJX2 215 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 B4DLN1 442 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 MTIF2P46199 727 aaKnown RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 VAV2P52735 878 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TMTC2Q8N394 836 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC97Q96F63 343 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 SLC39A2Q9NP94 309 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIMK2-202ENST00000333611 MYH15Q9Y2K3 1946 aa13.09□□□□□ -0.31
LIMK2-202ENST00000333611 FAM237AA0A1B0GTK4 181 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 NDUFA10O95299 355 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 PRCPP42785 496 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 KLK7P49862 253 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 GRIK3Q13003 919 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 TAF11Q15544 211 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.31
LIMK2-202ENST00000333611 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.31
LIMK2-202ENST00000333611 ZIM3Q96PE6 472 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 UIMC1Q96RL1 719 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 OSBPL1AQ9BXW6 950 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 EPN3Q9H201 632 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 SUDS3Q9H7L9 328 aaPredicted RBP13.08□□□□□ -0.31
LIMK2-202ENST00000333611 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 DUSP10Q9Y6W6 482 aa13.08□□□□□ -0.31
LIMK2-202ENST00000333611 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 XDHP47989 1333 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 STK36Q9NRP7 1315 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 USP17L12C9JPN9 530 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 USP17L21D6R901 530 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
LIMK2-202ENST00000333611 MRPL12P52815 198 aaKnown RBP13.08□□□□□ -0.32
LIMK2-202ENST00000333611 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 VIPAS39Q9H9C1 493 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms