RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 SLC45A1Q9Y2W3 748 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 RIPK3Q9Y572 518 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 BTBD19C9JJ37 291 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 CFBP00751 764 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 OSBPP22059 807 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 HSD17B4P51659 736 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 UBE2HP62256 183 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 MCTP2Q6DN12 878 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 ANKRD23Q86SG2 305 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 TRERF1Q96PN7 1200 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 RNF146Q9NTX7 359 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 BTBD7Q9P203 1132 aa13.78□□□□□ -0.2
TRIM49B-201ENST00000332682 TMEM88BA6NKF7 163 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 EDIL3O43854 480 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 PEX10O60683 326 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 FOSP01100 380 aaPredicted RBP13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 SLC10A3P09131 477 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 STAT3P40763 770 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 ME1P48163 572 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 FSTL1Q12841 308 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 ZNF174Q15697 407 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 MCF2L2Q86YR7 1114 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 PNMA3Q9UL41 463 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 CEP131Q9UPN4 1083 aa13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
TRIM49B-201ENST00000332682 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 SPDYE3A6NKU9 549 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 PDHXO00330 501 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 PPP6R2O75170 966 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 CNMDO75829 334 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 BMP15O95972 392 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 MARCKSP29966 332 aaPredicted RBP13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 MCM7P33993 719 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 PLS1Q14651 629 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 LETM2Q2VYF4 491 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 GPT2Q8TD30 523 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 PTPN18Q99952 460 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 PCDHA7Q9UN72 937 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
TRIM49B-201ENST00000332682 FAM155AB1AL88 458 aaPredicted RBP13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 TRAK2O60296 914 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 CYP2C8P10632 490 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 SREBF1P36956 1147 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 AXDND1Q5T1B0 1012 aaPredicted RBP13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 SLC30A10Q6XR72 485 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 SAMD3Q8N6K7 520 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 JMYQ8N9B5 988 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 HHIPL1Q96JK4 782 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 SPATC1LQ9H0A9 340 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 ACAD9Q9H845 621 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 COL20A1Q9P218 1284 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 RABGAP1Q9Y3P9 1069 aa13.75□□□□□ -0.21
TRIM49B-201ENST00000332682 MANSC4A6NHS7 340 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 CCNT1O60563 726 aaKnown RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 TDP2O95551 362 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 MBD3O95983 291 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 ARHGAP4P98171 946 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 PTGDRQ13258 359 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 KLHL40Q2TBA0 621 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 ADALQ6DHV7 355 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 RIOX2Q8IUF8 465 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 C4orf32Q8N8J7 132 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 GTF3C2Q8WUA4 911 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 PAGR1Q9BTK6 254 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 FBXO2Q9UK22 296 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 LCTP09848 1927 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 GOLGA6L4A6NEF3 574 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 NEMFO60524 1076 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 PTPREP23469 700 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 SKOR2Q2VWA4 1001 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 PPP4R3AQ6IN85 833 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 NSMFQ6X4W1 530 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 RNF207Q6ZRF8 634 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 SYTL5Q8TDW5 730 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 MOV10L1Q9BXT6 1211 aaKnown RBP13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
TRIM49B-201ENST00000332682 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms