RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ARVCFO00192 962 aa14.5□□□□□ -0.09
TPM3-204ENST00000323144 ZNF213O14771 459 aa14.5□□□□□ -0.09
TPM3-204ENST00000323144 CDC37Q16543 378 aaPredicted RBP14.5□□□□□ -0.09
TPM3-204ENST00000323144 ENAHQ8N8S7 591 aaPredicted RBP14.5□□□□□ -0.09
TPM3-204ENST00000323144 PNMA1Q8ND90 353 aa14.5□□□□□ -0.09
TPM3-204ENST00000323144 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.093e-15■■■□□ 16.8
TPM3-204ENST00000323144 DOCK5Q9H7D0 1870 aa14.5□□□□□ -0.09
TPM3-204ENST00000323144 CHD9Q3L8U1 2897 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 DYNC1LI2O43237 492 aaPredicted RBP14.49□□□□□ -0.09
TPM3-204ENST00000323144 TIMP1P01033 207 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 CD4P01730 458 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 RPS6P62753 249 aaKnown RBP14.49□□□□□ -0.09
TPM3-204ENST00000323144 SMAD3P84022 425 aaKnown RBP14.49□□□□□ -0.09
TPM3-204ENST00000323144 TTC22Q5TAA0 569 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 RNF207Q6ZRF8 634 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 PPP1R13LQ8WUF5 828 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 VTI1AQ96AJ9 217 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 DSCC1Q9BVC3 393 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
TPM3-204ENST00000323144 SUPT16HQ9Y5B9 1047 aaKnown RBP14.49□□□□□ -0.09
TPM3-204ENST00000323144 CSF2RAP15509 400 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 EDNRBP24530 442 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 CYP2C18P33260 490 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 KIAA1211Q6ZU35 1233 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 SLC43A3Q8NBI5 491 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 MYLIPQ8WY64 445 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 AP5M1Q9H0R1 490 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 KAT14Q9H8E8 782 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 COL20A1Q9P218 1284 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 ADD3Q9UEY8 706 aaKnown RBP14.48□□□□□ -0.09
TPM3-204ENST00000323144 TAF6LQ9Y6J9 622 aa14.48□□□□□ -0.09
TPM3-204ENST00000323144 HIP1O00291 1037 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 B4GALT4O60513 344 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 ARIH2O95376 493 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 ACRP10323 421 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 ITGA7Q13683 1181 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 DUSP28Q4G0W2 176 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 GPATCH4Q5T3I0 446 aaKnown RBP14.47□□□□□ -0.09
TPM3-204ENST00000323144 MFSD5Q6N075 450 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 C16orf59Q7L2K0 433 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 IQCA1Q86XH1 822 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 COPS5Q92905 334 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 TTC14Q96N46 770 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 ZSCAN10Q96SZ4 725 aaPredicted RBP14.47□□□□□ -0.09
TPM3-204ENST00000323144 CDX2Q99626 313 aaPredicted RBP14.47□□□□□ -0.09
TPM3-204ENST00000323144 TRPV6Q9H1D0 765 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 WNT8AQ9H1J5 351 aa14.47□□□□□ -0.09
TPM3-204ENST00000323144 RAD50Q92878 1312 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 TLR3O15455 904 aaKnown RBP14.46□□□□□ -0.09
TPM3-204ENST00000323144 DNAJB2P25686 324 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 PDE4DQ08499 809 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 PPIGQ13427 754 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■□□□□ 9.5
TPM3-204ENST00000323144 IMMTQ16891 758 aaKnown RBP14.46□□□□□ -0.09
TPM3-204ENST00000323144 QRICH1Q2TAL8 776 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 TMEM240Q5SV17 173 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 IQSEC1Q6DN90 963 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 CYB5R4Q7L1T6 521 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 DGKHQ86XP1 1220 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 OR6J1Q8NGC5 347 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 WDR11Q9BZH6 1224 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 HIPK3Q9H422 1215 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 MYH7BA7E2Y1 1941 aa14.46□□□□□ -0.09
TPM3-204ENST00000323144 RBM47A0AV96 593 aaKnown RBP14.45□□□□□ -0.1
TPM3-204ENST00000323144 GRXCR1A8MXD5 290 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 RBAK-RBAKDNI3L0D1 243 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 PBX2P40425 430 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 PURAQ00577 322 aaKnown RBP14.45□□□□□ -0.1
TPM3-204ENST00000323144 PPP2R5BQ15173 497 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 STAG2Q8N3U4 1231 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 TBC1D5Q92609 795 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
TPM3-204ENST00000323144 SEMA6BQ9H3T3 888 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 ZSWIM5Q9P217 1185 aa14.45□□□□□ -0.1
TPM3-204ENST00000323144 ABCB11O95342 1321 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 LOC102724159A0A0B4J2E5 919 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 OPLAHO14841 1288 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 DHX16O60231 1041 aaKnown RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 PPP1R11O60927 126 aaPredicted RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 CABYRO75952 493 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 MYL3P08590 195 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 CCL23P55773 120 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 PTH1RQ03431 593 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 PWP2Q15269 919 aaKnown RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 SEC23AQ15436 765 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 RASIP1Q5U651 963 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 PSRC1Q6PGN9 363 aaPredicted RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 MAFAQ8NHW3 353 aaPredicted RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 ANKS1AQ92625 1134 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 UBAC1Q9BSL1 405 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 JMJD4Q9H9V9 463 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 SENP2Q9HC62 589 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 TRMT13Q9NUP7 481 aaKnown RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 CXXC1Q9P0U4 656 aaPredicted RBP14.44□□□□□ -0.1
TPM3-204ENST00000323144 Q9Y3F1 56 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 CHD7Q9P2D1 2997 aa14.44□□□□□ -0.1
TPM3-204ENST00000323144 DLL1O00548 723 aa14.43□□□□□ -0.1
TPM3-204ENST00000323144 ZEB2O60315 1214 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms