RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ATAD5Q96QE3 1844 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 SLC26A4O43511 780 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 GTPBP6O43824 516 aaPredicted RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 PRR29P0C7W0 189 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 LMOD1P29536 600 aaPredicted RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 TMEM266Q2M3C6 531 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 SCAF8Q9UPN6 1271 aaKnown RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 MRPL11Q9Y3B7 192 aaKnown RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 OPLAHO14841 1288 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 TDP2O95551 362 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 FDX1P10109 184 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 SREBF1P36956 1147 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 RRAGBQ5VZM2 374 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 PRPF38AQ8NAV1 312 aaKnown RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 RNF181Q9P0P0 153 aa20.16■□□□□ 0.82
RAB39A-201ENST00000320578 DDX25Q9UHL0 483 aaKnown RBP20.16■□□□□ 0.82
RAB39A-201ENST00000320578 ABCB11O95342 1321 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.15■□□□□ 0.82
RAB39A-201ENST00000320578 SLC37A4O43826 429 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 INPP5BP32019 993 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 CIITAP33076 1130 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 STAT6P42226 847 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 TPM4P67936 248 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 PLA2G4DQ86XP0 818 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 AOPEPQ8N6M6 819 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 KIFC2Q96AC6 838 aa20.15■□□□□ 0.82
RAB39A-201ENST00000320578 A0A087WWV3 80 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 SPDYE3A6NKU9 549 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 TBX3O15119 743 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 CYP3A4P08684 503 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 SNAP25P60880 206 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 USH1GQ495M9 461 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 CABP7Q86V35 215 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 SLF1Q9BQI6 1058 aa20.14■□□□□ 0.81
RAB39A-201ENST00000320578 GOLGB1Q14789 3259 aaKnown RBP20.14■□□□□ 0.81
RAB39A-201ENST00000320578 DDNO94850 711 aaPredicted RBP20.13■□□□□ 0.81
RAB39A-201ENST00000320578 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.81
RAB39A-201ENST00000320578 BMP6P22004 513 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 CDC25BP30305 580 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 NCAPHQ15003 741 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 KARSQ15046 597 aaKnown RBP20.13■□□□□ 0.81
RAB39A-201ENST00000320578 ZYXQ15942 572 aaKnown RBP20.13■□□□□ 0.81
RAB39A-201ENST00000320578 Q4G0T1 1027 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 KLRG1Q96E93 195 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 C12orf42Q96LP6 360 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 PICK1Q9NRD5 415 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 ICAM1P05362 532 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 PTPRAP18433 802 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 ERCC5P28715 1186 aaPredicted RBP20.13■□□□□ 0.81
RAB39A-201ENST00000320578 TECP42680 631 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 ZNF75DP51815 510 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 BACE1P56817 501 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 ARHGAP4P98171 946 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 NAALADL2Q58DX5 795 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 GRAMD1CQ8IYS0 662 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 KCNMB3Q9NPA1 279 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 KBTBD4Q9NVX7 518 aa20.13■□□□□ 0.81
RAB39A-201ENST00000320578 DOCK1Q14185 1865 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
RAB39A-201ENST00000320578 C19orf81C9J6K1 198 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 TXKP42681 527 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 AFMP43652 599 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 MYL5Q02045 173 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 GHRHRQ02643 423 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 CCDC84Q86UT8 332 aaPredicted RBP20.12■□□□□ 0.81
RAB39A-201ENST00000320578 SLFN12Q8IYM2 578 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 ZNF280CQ8ND82 737 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 HAS1Q92839 578 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 MRFAP1L1Q96HT8 127 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 L3MBTL3Q96JM7 780 aaPredicted RBP20.12■□□□□ 0.81
RAB39A-201ENST00000320578 WRNIP1Q96S55 665 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 MTRQ99707 1265 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 RMND1Q9NWS8 449 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 LRWD1Q9UFC0 647 aa20.12■□□□□ 0.81
RAB39A-201ENST00000320578 GCOM1H8Y6P7 765 aaPredicted RBP20.11■□□□□ 0.81
RAB39A-201ENST00000320578 TPM3P06753 285 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 POLR2MP0CAP2 368 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 CDC25AP30304 524 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 PLCB2Q00722 1185 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 LDHDQ86WU2 507 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 CALML4Q96GE6 196 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 MMTAG2Q9BU76 263 aaKnown RBP20.11■□□□□ 0.81
RAB39A-201ENST00000320578 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 EMILIN3Q9NT22 766 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
RAB39A-201ENST00000320578 PP2D1A8MPX8 630 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 P2RX7Q99572 595 aaKnown RBP20.11■□□□□ 0.81
RAB39A-201ENST00000320578 GTPBP4Q9BZE4 634 aaKnown RBP20.11■□□□□ 0.81
RAB39A-201ENST00000320578 EHMT1Q9H9B1 1298 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 FBXO28Q9NVF7 368 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 STK17AQ9UEE5 414 aa20.11■□□□□ 0.81
RAB39A-201ENST00000320578 GOLGA6L6A8MZA4 724 aa20.1■□□□□ 0.81
RAB39A-201ENST00000320578 VCAM1P19320 739 aa20.1■□□□□ 0.81
RAB39A-201ENST00000320578 ISM2Q6H9L7 571 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms