RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 GYPCP04921 128 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 EPHB4P54760 987 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 INF2Q27J81 1249 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 GIGYF2Q6Y7W6 1299 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 RSRC2Q7L4I2 434 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 CCDC63Q8NA47 563 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 BPIFA3Q9BQP9 254 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 TNKSO95271 1327 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 BMP15O95972 392 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 HOXB7P09629 217 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TMOD1P28289 359 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 KIF5BP33176 963 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TNNI2P48788 182 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 KLK7P49862 253 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 AMPD3Q01432 767 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 MKRN4PQ13434 485 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 PLS1Q14651 629 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 RPS6KA1Q15418 735 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 IFNL3Q8IZI9 196 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 ZNF444Q8N0Y2 327 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 HPS3Q969F9 1004 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 STIM2Q9P246 746 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 MMP1P03956 469 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 CYP19A1P11511 503 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 ERFP50548 548 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 POLR2FP61218 127 aaKnown RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 KLHL30Q0D2K2 578 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 FMNL3Q8IVF7 1028 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TSGA10Q9BZW7 698 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 KLC4Q9NSK0 619 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 AGPAT5Q9NUQ2 364 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 PLAAQ9Y263 795 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TOPAZ1Q8N9V7 1692 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 CCDC160A6NGH7 325 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 CCNT1O60563 726 aaKnown RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 LACTBP83111 547 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 CACNB1Q02641 598 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 SLC9C1Q4G0N8 1177 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TCP11X2Q5H9J9 407 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 CAPN12Q6ZSI9 719 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TMTC2Q8N394 836 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TRIML1Q8N9V2 468 aa8.31□□□□□ -1.08
CDHR3-201ENST00000317716 TRIM6Q9C030 488 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 DNAJC17Q9NVM6 304 aaKnown RBP8.31□□□□□ -1.08
CDHR3-201ENST00000317716 COL16A1Q07092 1604 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 KRIT1O00522 736 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 SH2B2O14492 632 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 MMP10P09238 476 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 GOLGA8HP0CJ92 632 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 PTPREP23469 700 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 DNM2P50570 870 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 EIF6P56537 245 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 ERVK-24P63145 666 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 HDLBPQ00341 1268 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 EXOSC10Q01780 885 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 TMEM266Q2M3C6 531 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 OTUD6AQ7L8S5 288 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 VSIG1Q86XK7 387 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 DZIP1Q86YF9 867 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 TEX2Q8IWB9 1127 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 HDAC7Q8WUI4 952 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 SPDL1Q96EA4 605 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 RPGRIP1Q96KN7 1286 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 UBN2Q6ZU65 1347 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 NRKQ7Z2Y5 1582 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 MAGEB6P1A0A0J9YX57 407 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 BICDL2A1A5D9 508 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 ZSCAN5CA6NGD5 496 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 TCP1P17987 556 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 PRCPP42785 496 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 NSRP1Q9H0G5 558 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 GOLPH3Q9H4A6 298 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 INTS13Q9NVM9 706 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 MCM9Q9NXL9 1143 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 PSD3Q9NYI0 1048 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 NEDD4P46934 1319 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 H0Y3Z8 333 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 EIF3HO15372 352 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 PLEKHA8P1O95397 391 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 ELF1P32519 619 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 TECP42680 631 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 NR1I3Q14994 352 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 GSDMAQ96QA5 445 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 ELAC2Q9BQ52 826 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 LSM14BQ9BX40 385 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 TCEAL9Q9UHQ7 104 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 TUBE1Q9UJT0 475 aa8.3□□□□□ -1.08
CDHR3-201ENST00000317716 VIRMAQ69YN4 1812 aaKnown RBP8.3□□□□□ -1.08
CDHR3-201ENST00000317716 PHF20L1A8MW92 1017 aa8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CD44P16070 742 aaKnown RBP8.29□□□□□ -1.08
CDHR3-201ENST00000317716 CARSP49589 748 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms