RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ELOA2Q8IYF1 753 aaPredicted RBP28.32■■■□□ 2.12
CDPF1-201ENST00000314567 KCNH3Q9ULD8 1083 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 PCDHA6Q9UN73 950 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 PCDHA8Q9Y5H6 950 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 TOMM70O94826 608 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 CPXCR1Q8N123 301 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 AGBL1Q96MI9 1066 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 AMNQ9BXJ7 453 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 ANO10Q9NW15 660 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 ZNF536O15090 1300 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L15C9J2P7 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L13C9JLJ4 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L11C9JVI0 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L18D6R9N7 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L22D6RA61 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L17D6RBQ6 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L19D6RCP7 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L20D6RJB6 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 USP17L24Q0WX57 530 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 SNAPC2Q13487 334 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 KIAA1468Q9P260 1216 aa28.31■■■□□ 2.12
CDPF1-201ENST00000314567 DSG3P32926 999 aa28.3■■■□□ 2.12
CDPF1-201ENST00000314567 COG2Q14746 738 aa28.3■■■□□ 2.12
CDPF1-201ENST00000314567 SPRYD7Q5W111 196 aa28.3■■■□□ 2.12
CDPF1-201ENST00000314567 KRT25Q7Z3Z0 450 aa28.3■■■□□ 2.12
CDPF1-201ENST00000314567 PROCA1Q8NCQ7 364 aaPredicted RBP28.3■■■□□ 2.12
CDPF1-201ENST00000314567 SLC38A10Q9HBR0 1119 aa28.3■■■□□ 2.12
CDPF1-201ENST00000314567 RAVER2Q9HCJ3 691 aaKnown RBP28.3■■■□□ 2.12
CDPF1-201ENST00000314567 VWA5AO00534 786 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 ZNF174Q15697 407 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 GPAT2Q6NUI2 795 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 POTEEQ6S8J3 1075 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 TRIM44Q96DX7 344 aaPredicted RBP28.29■■■□□ 2.12
CDPF1-201ENST00000314567 MS4A4AQ96JQ5 239 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 UBE2SQ16763 222 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 TMEM260Q9NX78 707 aa28.29■■■□□ 2.12
CDPF1-201ENST00000314567 SPDYE16A6NNV3 312 aaPredicted RBP28.28■■■□□ 2.12
CDPF1-201ENST00000314567 WNT7AO00755 349 aa28.28■■■□□ 2.12
CDPF1-201ENST00000314567 ZNF157P51786 506 aaPredicted RBP28.28■■■□□ 2.12
CDPF1-201ENST00000314567 BIN2Q9UBW5 565 aaPredicted RBP28.28■■■□□ 2.12
CDPF1-201ENST00000314567 AGTPBP1Q9UPW5 1226 aa28.28■■■□□ 2.12
CDPF1-201ENST00000314567 OPLAHO14841 1288 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 ZNF165P49910 485 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 GRIN1Q05586 938 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 PTGDRQ13258 359 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 ARL6IP4Q66PJ3 421 aaKnown RBP28.27■■■□□ 2.12
CDPF1-201ENST00000314567 KRBA2Q6ZNG9 492 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 CSRNP2Q9H175 543 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 CBX8Q9HC52 389 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 HOOK1Q9UJC3 728 aaKnown RBP28.27■■■□□ 2.12
CDPF1-201ENST00000314567 ADCY7P51828 1080 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 ZRSR1Q15695 479 aaKnown RBP28.27■■■□□ 2.12
CDPF1-201ENST00000314567 RASAL3Q86YV0 1011 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 P2RX7Q99572 595 aaKnown RBP28.27■■■□□ 2.12
CDPF1-201ENST00000314567 DNAJC25Q9H1X3 360 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 CCPG1Q9ULG6 757 aa28.27■■■□□ 2.12
CDPF1-201ENST00000314567 ABT1Q9ULW3 272 aaKnown RBP28.27■■■□□ 2.12
CDPF1-201ENST00000314567 BRI3BPQ8WY22 251 aa28.26■■■□□ 2.11
CDPF1-201ENST00000314567 ASCC2Q9H1I8 757 aaPredicted RBP28.26■■■□□ 2.11
CDPF1-201ENST00000314567 CCL15-CCL14A0A0B4J2E2 113 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 ICAM1P05362 532 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 HOXA7P31268 230 aaPredicted RBP28.25■■■□□ 2.11
CDPF1-201ENST00000314567 CCL15Q16663 113 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 JAKMIP3Q5VZ66 844 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 USP17L6PQ6QN14 398 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 FASTKD5Q7L8L6 764 aaKnown RBP28.25■■■□□ 2.11
CDPF1-201ENST00000314567 CNNM3Q8NE01 707 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 REPS2Q8NFH8 660 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 TBC1D5Q92609 795 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 PSTPIP2Q9H939 334 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 HOMER2Q9NSB8 354 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 TMEM132BQ14DG7 1078 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 NONOQ15233 471 aaKnown RBP eCLIP28.25■■■□□ 2.11
CDPF1-201ENST00000314567 REXO1Q8N1G1 1221 aaKnown RBP28.25■■■□□ 2.11
CDPF1-201ENST00000314567 RIC8AQ9NPQ8 531 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 USP25Q9UHP3 1055 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 ADAMTS5Q9UNA0 930 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 TLL2Q9Y6L7 1015 aa28.25■■■□□ 2.11
CDPF1-201ENST00000314567 ZBED4O75132 1171 aa28.24■■■□□ 2.11
CDPF1-201ENST00000314567 MCM7P33993 719 aa28.24■■■□□ 2.11
CDPF1-201ENST00000314567 GTF2A2P52657 109 aa28.24■■■□□ 2.11
CDPF1-201ENST00000314567 IRX3P78415 501 aaPredicted RBP28.24■■■□□ 2.11
CDPF1-201ENST00000314567 ORC2Q13416 577 aaPredicted RBP28.24■■■□□ 2.11
CDPF1-201ENST00000314567 SPECC1Q5M775 1068 aa28.24■■■□□ 2.11
CDPF1-201ENST00000314567 RGMBQ6NW40 437 aa28.24■■■□□ 2.11
CDPF1-201ENST00000314567 KANK3Q6NY19 840 aa28.24■■■□□ 2.11
CDPF1-201ENST00000314567 NAT10Q9H0A0 1025 aaKnown RBP28.24■■■□□ 2.11
CDPF1-201ENST00000314567 CTDP1Q9Y5B0 961 aaPredicted RBP28.24■■■□□ 2.11
CDPF1-201ENST00000314567 LAD1O00515 517 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 CEP57L1Q8IYX8 460 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 CCDC34Q96HJ3 373 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 HOXC10Q9NYD6 342 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 TUBE1Q9UJT0 475 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 RIPK3Q9Y572 518 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 TMEM88BA6NKF7 163 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 BTBD19C9JJ37 291 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 ZBTB48P10074 688 aaPredicted RBP28.23■■■□□ 2.11
CDPF1-201ENST00000314567 CETPP11597 493 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 ALAS1P13196 640 aa28.23■■■□□ 2.11
CDPF1-201ENST00000314567 LONRF3Q496Y0 759 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms