RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 ZC3H14Q6PJT7 736 aaKnown RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 MYOCDQ8IZQ8 938 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 BANK1Q8NDB2 785 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 STAG1Q8WVM7 1258 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 ALDH8A1Q9H2A2 487 aaPredicted RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 RAVER2Q9HCJ3 691 aaKnown RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 MTCH2Q9Y6C9 303 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 CNMDO75829 334 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 ZNF865P0CJ78 1059 aaPredicted RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 TRERF1Q96PN7 1200 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 CCDC8Q9H0W5 538 aaPredicted RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 NAPBQ9H115 298 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 MGAMO43451 1857 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 RFX7Q2KHR2 1363 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 TSPY2A6NKD2 308 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 NOP56O00567 594 aaKnown RBP6.84□□□□□ -1.31
ZNF440-201ENST00000304060 MBD4O95243 580 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 NT5C2P49902 561 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 GRB10Q13322 594 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 APBB2Q92870 758 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 TMEM232C9JQI7 657 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 F5H6K3 240 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 PDE6AP16499 860 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 PBX2P40425 430 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 RABGGTBP53611 331 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 KLRC3Q07444 240 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 CD207Q9UJ71 328 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 MTUS1Q9ULD2 1270 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 GOLIM4O00461 696 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 CTNNB1P35222 781 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 ATP8B2P98198 1209 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 TMEM132BQ14DG7 1078 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 MRPL38Q96DV4 380 aaKnown RBP6.84□□□□□ -1.31
ZNF440-201ENST00000304060 WDR11Q9BZH6 1224 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 SEMA4AQ9H3S1 761 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 ZNF215Q9UL58 517 aaPredicted RBP6.84□□□□□ -1.31
ZNF440-201ENST00000304060 STX8Q9UNK0 236 aa6.84□□□□□ -1.31
ZNF440-201ENST00000304060 FAM86C2PA6NEL3 165 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 STK25O00506 426 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 ATP2A1O14983 1001 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 SHMT1P34896 483 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 CDK7P50613 346 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 PTGISQ16647 500 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 DGKDQ16760 1214 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 GNPTABQ3T906 1256 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 LRRC8DQ7L1W4 858 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 ADHFE1Q8IWW8 467 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 RGS22Q8NE09 1264 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 SPOCK2Q92563 424 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 KAZALD1Q96I82 304 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 NECAB3Q96P71 396 aaPredicted RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 MEIS3Q99687 375 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 EHMT1Q9H9B1 1298 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 TXNP10599 105 aaKnown RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 KCNQ1P51787 676 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 BEX3Q00994 111 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 DUSP28Q4G0W2 176 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 CES5AQ6NT32 575 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 FAM178BQ8IXR5 827 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 FBXL6Q8N531 539 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 LRRCC1Q9C099 1032 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 NR2E1Q9Y466 385 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 STXBP3O00186 592 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 ITGB8P26012 769 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 TFF2Q03403 129 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 RNF41Q9H4P4 317 aaPredicted RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 CCDC171Q6TFL3 1326 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 ZNF532Q9HCE3 1301 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 CAND2O75155 1236 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 DMTNQ08495 405 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 SMAD4Q13485 552 aaKnown RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 RASIP1Q5U651 963 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 EEPD1Q7L9B9 569 aa6.83□□□□□ -1.32
ZNF440-201ENST00000304060 MTERF4Q7Z6M4 381 aaKnown RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 NKD2Q969F2 451 aaPredicted RBP6.83□□□□□ -1.32
ZNF440-201ENST00000304060 LGR5O75473 907 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 AKR1B1P15121 316 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 ERVK-21P61565 698 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 CCDC144CPQ8IYA2 1237 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 PABPC5Q96DU9 382 aaKnown RBP6.82□□□□□ -1.32
ZNF440-201ENST00000304060 BACH2Q9BYV9 841 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 TRPV6Q9H1D0 765 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 MRPL11Q9Y3B7 192 aaKnown RBP6.82□□□□□ -1.32
ZNF440-201ENST00000304060 MRVI1Q9Y6F6 885 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 PTPRZ1P23471 2315 aaPredicted RBP6.82□□□□□ -1.32
ZNF440-201ENST00000304060 CALML3P27482 149 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 EPHB4P54760 987 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 NHLH1Q02575 133 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 STXBP2Q15833 593 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 RNF207Q6ZRF8 634 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 DCAF4Q8WV16 495 aa6.82□□□□□ -1.32
ZNF440-201ENST00000304060 CUL5Q93034 780 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms