RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 TPM3P06753 285 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 CASP1P29466 404 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 TEPSINQ96N21 525 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 GSDMAQ96QA5 445 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 GLIS2Q9BZE0 524 aaPredicted RBP16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 CCSER1Q9C0I3 900 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 GPRC5DQ9NZD1 345 aa16.37■□□□□ 0.21
SHCBP1-201ENST00000303383 FOSP01100 380 aaPredicted RBP16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 CLK2P49760 499 aaKnown RBP16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 PICK1Q9NRD5 415 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 IKBKBO14920 756 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 ZNF76P36508 570 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 MAP3K10Q02779 954 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 GGA3Q9NZ52 723 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 GTPBP6O43824 516 aaPredicted RBP16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 SLC37A4O43826 429 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 CFBP00751 764 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 PPP4R3AQ6IN85 833 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 KLHL10Q6JEL2 608 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 TANGO6Q9C0B7 1094 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 GINM1Q9NU53 330 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
SHCBP1-201ENST00000303383 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 NT5DC1Q5TFE4 455 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 PRAMEF18Q5VWM3 479 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 SARM1Q6SZW1 724 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 SERPINC1P01008 464 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 MORC3Q14149 939 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 E2F4Q16254 413 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 KRT79Q5XKE5 535 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 WRNIP1Q96S55 665 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 ZKSCAN5Q9Y2L8 839 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 PHF20L1A8MW92 1017 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 SARSP49591 514 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 DHX8Q14562 1220 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 TPD52L1Q16890 204 aaPredicted RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 MRPL11Q9Y3B7 192 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-201ENST00000303383 INPP5BP32019 993 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 EPS15P42566 896 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 USP11P51784 963 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 DPYDQ12882 1025 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 PDXDC2PQ6P474 469 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 SH3RF1Q7Z6J0 888 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 TAL1P17542 331 aaPredicted RBP16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 LPAR1Q92633 364 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 AS3MTQ9HBK9 375 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 PCDHA12Q9UN75 941 aa16.34■□□□□ 0.21
SHCBP1-201ENST00000303383 MEIS2O14770 477 aa16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 PLCG1P19174 1290 aa16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 ARHGAP4P98171 946 aa16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 AMPD3Q01432 767 aa16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 ZNF830Q96NB3 372 aaPredicted RBP16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 CUEDC2Q9H467 287 aa16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 RRAGDQ9NQL2 400 aaPredicted RBP16.33■□□□□ 0.21
SHCBP1-201ENST00000303383 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 CUL4BQ13620 913 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 POLR2MP0CAP2 368 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 USP14P54578 494 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 MRFAP1L1Q96HT8 127 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 MTMR9Q96QG7 549 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 UIMC1Q96RL1 719 aa16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHCBP1-201ENST00000303383 DDNO94850 711 aaPredicted RBP16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 PRKG1Q13976 671 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 PRR16Q569H4 304 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 MAGEF1Q9HAY2 307 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 IFNKQ9P0W0 207 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 POTEMA6NI47 508 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 SPP2Q13103 211 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 MTMR2Q13614 643 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 SUPT20HL1Q3ZLR7 823 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 PRPF38AQ8NAV1 312 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 SPATA20Q8TB22 786 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 KIAA1683Q9H0B3 1180 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 PLA2G6O60733 806 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 FLOT1O75955 427 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 RPN1P04843 607 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 BMP6P22004 513 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 PDIA5Q14554 519 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms