RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 LZICQ8WZA0 190 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 EIF3CQ99613 913 aaKnown RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 POLE2P56282 527 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 APBA1Q02410 837 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 TTC19Q6DKK2 380 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 MAPKAPK5Q8IW41 473 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 CCDC127Q96BQ5 260 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 AS3MTQ9HBK9 375 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 ATP10BO94823 1461 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 COL17A1Q9UMD9 1497 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 CFLARO15519 480 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SOX5P35711 763 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 POLR2FP61218 127 aaKnown RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 TIMM10P62072 90 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 DACH2Q96NX9 599 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 DCTPP1Q9H773 170 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 MAP3K7O43318 606 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 ADCY1Q08828 1119 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 PNOCQ13519 176 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 AOC3Q16853 763 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 ALKBH8Q96BT7 664 aaKnown RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SLC12A6Q9UHW9 1150 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 WDR7Q9Y4E6 1490 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 EYA2O00167 538 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 ARHGEF9O43307 516 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 ZKSCAN8Q15776 578 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 TRIM67Q6ZTA4 783 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 TRIML2Q8N7C3 387 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 ATP8A2Q9NTI2 1148 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 G3BP2Q9UN86 482 aaKnown RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 CHEK2O96017 543 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 MSH2P43246 934 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 YWHAHQ04917 246 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 MORC3Q14149 939 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 LRRC23Q53EV4 343 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 FAM178BQ8IXR5 827 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 CDV3Q9UKY7 258 aaKnown RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 F8W8V4 182 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 XPOTO43592 962 aaKnown RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 TOM1L1O75674 476 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 DMP1Q13316 513 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 DLGAP5Q15398 846 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 RNF207Q6ZRF8 634 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 FAM149B1Q96BN6 582 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 XAGE2Q96GT9 111 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 UPF3AQ9H1J1 476 aaKnown RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 TXLNGQ9NUQ3 528 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 EPHB1P54762 984 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 IGBP1P78318 339 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 GUCY2DQ02846 1103 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 E2F5Q15329 346 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 PANK4Q9NVE7 773 aa11.28□□□□□ -0.6
CLIP1-201ENST00000302528 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
CLIP1-201ENST00000302528 H0YIN7 160 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 ALAS1P13196 640 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 HSPA6P17066 643 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 CCT5P48643 541 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 DAB2P98082 770 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 PTK2Q05397 1052 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 IFT88Q13099 833 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 GANCQ8TET4 914 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 TEX12Q9BXU0 123 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 INSRP06213 1382 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 MYO1FO00160 1098 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 SERPINI2O75830 405 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 POLGP54098 1239 aaPredicted RBP11.27□□□□□ -0.6
CLIP1-201ENST00000302528 OCA2Q04671 838 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 PTK2BQ14289 1009 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 KCTD16Q68DU8 428 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 METTL23Q86XA0 190 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 SERPINI1Q99574 410 aa11.27□□□□□ -0.6
CLIP1-201ENST00000302528 TRIM15Q9C019 465 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms