RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
SMG8-201ENST00000300917 RBL2Q08999 1139 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 STK4Q13043 487 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 NR1I3Q14994 352 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 CALML4Q96GE6 196 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 BAG1Q99933 345 aaPredicted RBP16.38■□□□□ 0.21
SMG8-201ENST00000300917 STAT3P40763 770 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 MRPL12P52815 198 aaKnown RBP16.37■□□□□ 0.21
SMG8-201ENST00000300917 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
SMG8-201ENST00000300917 APTXQ7Z2E3 356 aaKnown RBP16.37■□□□□ 0.21
SMG8-201ENST00000300917 KCNK18Q7Z418 384 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 TC2NQ8N9U0 490 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 SRRTQ9BXP5 876 aaKnown RBP16.37■□□□□ 0.21
SMG8-201ENST00000300917 CCSER1Q9C0I3 900 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 POLD4Q9HCU8 107 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 TOGARAM2Q6ZUX3 1019 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 ZMYND15Q9H091 742 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 EHD4Q9H223 541 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 UBXN2AP68543 259 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 PPFIBP1Q86W92 1011 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 EXOC1Q9NV70 894 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 TBC1D7Q9P0N9 293 aa16.37■□□□□ 0.21
SMG8-201ENST00000300917 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
SMG8-201ENST00000300917 A0A1B0GTH6 734 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 SOWAHDA6NJG2 315 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 KLRC4O43908 158 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 CASP14P31944 242 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 TERF1P54274 439 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 KCNJ12Q14500 433 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 LRRC41Q15345 812 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 FILIP1LQ4L180 1135 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 CCDC174Q6PII3 467 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 TMEM179Q6ZVK1 233 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 TRIM9Q9C026 710 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
SMG8-201ENST00000300917 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 GRB10Q13322 594 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 TMEM266Q2M3C6 531 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 CDKAL1Q5VV42 579 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 P2RX7Q99572 595 aaKnown RBP16.36■□□□□ 0.21
SMG8-201ENST00000300917 PYM1Q9BRP8 204 aaKnown RBP16.36■□□□□ 0.21
SMG8-201ENST00000300917 DNAI1Q9UI46 699 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 A0A0U1RQJ8 604 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 LAD1O00515 517 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMG8-201ENST00000300917 PRPHP41219 470 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 ECM1Q16610 540 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 RSBN1LQ6PCB5 846 aaPredicted RBP16.36■□□□□ 0.21
SMG8-201ENST00000300917 NYAP1Q6ZVC0 841 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
SMG8-201ENST00000300917 ESYT2A0FGR8 921 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 GLIS3Q8NEA6 775 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 MTMR9Q96QG7 549 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 GLIS2Q9BZE0 524 aaPredicted RBP16.35■□□□□ 0.21
SMG8-201ENST00000300917 ZHX3Q9H4I2 956 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
SMG8-201ENST00000300917 RWDD2AQ9UIY3 292 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 UBXN1Q04323 297 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 NBPF9Q3BBW0 867 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 PRR16Q569H4 304 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 TATDN1Q6P1N9 297 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 PNMA5Q96PV4 448 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
SMG8-201ENST00000300917 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
SMG8-201ENST00000300917 BAG6P46379 1132 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMG8-201ENST00000300917 ADSSL1Q8N142 457 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 MYMKA6NI61 221 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 COPB1P53618 953 aaKnown RBP16.34■□□□□ 0.21
SMG8-201ENST00000300917 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 KRT79Q5XKE5 535 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 ZNF710Q8N1W2 664 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 HAS1Q92839 578 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 PCDHA12Q9UN75 941 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 AKR1B15C9JRZ8 316 aaPredicted RBP16.34■□□□□ 0.21
SMG8-201ENST00000300917 BMP3P12645 472 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
SMG8-201ENST00000300917 TBX2Q13207 712 aaPredicted RBP16.34■□□□□ 0.21
SMG8-201ENST00000300917 TCP11X2Q5H9J9 407 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 SV2BQ7L1I2 683 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 TMEM139Q8IV31 216 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 ANO3Q9BYT9 981 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
SMG8-201ENST00000300917 MEIS1O00470 390 aa16.33■□□□□ 0.2
SMG8-201ENST00000300917 PSMA7O14818 248 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms