RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GOLGA6L4A6NEF3 574 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 GCOM1H8Y6P7 765 aaPredicted RBP28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 CFBP00751 764 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 POLR2MP0CAP2 368 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 PTPREP23469 700 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 HSD17B4P51659 736 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 ATP2C1P98194 919 aaPredicted RBP28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 PABPC4Q13310 644 aaKnown RBP eCLIP28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 SAMD3Q8N6K7 520 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 MB21D1Q8N884 522 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 ANO3Q9BYT9 981 aa28.06■■■□□ 2.08
GTF2A1-201ENST00000298173 A0A1W2PQ27 194 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 A0A1W2PQ64 194 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 A0A1W2PQD8 194 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 HOXA13P31271 388 aaPredicted RBP28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 MCM7P33993 719 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 IRX3P78415 501 aaPredicted RBP28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 PTGDRQ13258 359 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 MUM1L1Q5H9M0 696 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 TRERF1Q96PN7 1200 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 MAP3K20Q9NYL2 800 aaKnown RBP28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 FBXO2Q9UK22 296 aaPredicted RBP28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 SRPRBQ9Y5M8 271 aaKnown RBP28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 MRVI1Q9Y6F6 885 aa28.05■■■□□ 2.08
GTF2A1-201ENST00000298173 NFIBO00712 420 aa28.04■■■□□ 2.08
GTF2A1-201ENST00000298173 ORC2Q13416 577 aaPredicted RBP28.04■■■□□ 2.08
GTF2A1-201ENST00000298173 LETM2Q2VYF4 491 aa28.04■■■□□ 2.08
GTF2A1-201ENST00000298173 MCF2L2Q86YR7 1114 aa28.04■■■□□ 2.08
GTF2A1-201ENST00000298173 TEX13BQ9BXU2 312 aa28.04■■■□□ 2.08
GTF2A1-201ENST00000298173 SLC45A1Q9Y2W3 748 aa28.04■■■□□ 2.08
GTF2A1-201ENST00000298173 STAT3P40763 770 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 USP11P51784 963 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 HERVK_113P62684 666 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 SNRNP48Q6IEG0 339 aaKnown RBP28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 KRI1Q8N9T8 703 aaKnown RBP28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 SPDYE3A6NKU9 549 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 OSBPP22059 807 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 TKFCQ3LXA3 575 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 PPP4R3AQ6IN85 833 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 BRI3BPQ8WY22 251 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 BTBD7Q9P203 1132 aa28.03■■■□□ 2.08
GTF2A1-201ENST00000298173 CCL15-CCL14A0A0B4J2E2 113 aa28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 CCNT1O60563 726 aaKnown RBP28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 CUTAO60888 179 aa28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 TOMM70O94826 608 aa28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 SREBF1P36956 1147 aa28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 MKRN3Q13064 507 aaKnown RBP28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 CCL15Q16663 113 aa28.02■■■□□ 2.08
GTF2A1-201ENST00000298173 TPRNQ4KMQ1 711 aa28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 ARL6IP4Q66PJ3 421 aaKnown RBP28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 ZNF579Q8NAF0 562 aaKnown RBP28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 CLIC6Q96NY7 704 aa28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 MAF1Q9H063 256 aa28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 RNF146Q9NTX7 359 aa28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 RBBP6Q7Z6E9 1792 aaKnown RBP28.01■■■□□ 2.07
GTF2A1-201ENST00000298173 BTBD19C9JJ37 291 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 CNMDO75829 334 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 LIG1P18858 919 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 CMA1P23946 247 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 ANKRD23Q86SG2 305 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 RASAL3Q86YV0 1011 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 CCAR1Q8IX12 1150 aaKnown RBP28■■■□□ 2.07
GTF2A1-201ENST00000298173 FERMT2Q96AC1 680 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 TMEM60Q9H2L4 133 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 HOMER2Q9NSB8 354 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 TLL2Q9Y6L7 1015 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 CYP3A7-CYP3A51PA0A087WV96 503 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 TESPA1A2RU30 521 aaPredicted RBP28■■■□□ 2.07
GTF2A1-201ENST00000298173 LAD1O00515 517 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 CYP3A7P24462 503 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 GRIN1Q05586 938 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 RGMBQ6NW40 437 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 SHC4Q6S5L8 630 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 FCHSD1Q86WN1 690 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 RBPJLQ9UBG7 517 aa28■■■□□ 2.07
GTF2A1-201ENST00000298173 CYP3A4P08684 503 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 ZNF157P51786 506 aaPredicted RBP27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 ARHGAP4P98171 946 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 MOXD1Q6UVY6 613 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 RIOX2Q8IUF8 465 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 MBOAT7Q96N66 472 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 GOLPH3LQ9H4A5 285 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 COL20A1Q9P218 1284 aa27.99■■■□□ 2.07
GTF2A1-201ENST00000298173 FAM237AA0A1B0GTK4 181 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 TDP2O95551 362 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 GCFC2P16383 781 aaKnown RBP27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 IL17AQ16552 155 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 ENGASEQ8NFI3 743 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 SYTL5Q8TDW5 730 aaPredicted RBP27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 NAP1L4Q99733 375 aaKnown RBP27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 PTPN18Q99952 460 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 TMEM63CQ9P1W3 806 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 PNMA3Q9UL41 463 aa27.98■■■□□ 2.07
GTF2A1-201ENST00000298173 PEX10O60683 326 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 CIITAP33076 1130 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 PRPHP41219 470 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 RPS6P62753 249 aaKnown RBP27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 PLS1Q14651 629 aa27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 MRPS27Q92552 414 aaKnown RBP27.97■■■□□ 2.07
GTF2A1-201ENST00000298173 SPATC1LQ9H0A9 340 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms