RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 DUSP10Q9Y6W6 482 aa18.61■□□□□ 0.57
RPN1-201ENST00000296255 LRRIQ3A6PVS8 624 aaPredicted RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 MTIF2P46199 727 aaKnown RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 USP14P54578 494 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 C16orf86Q6ZW13 317 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 NOC4LQ9BVI4 516 aaKnown RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 GBP3Q9H0R5 595 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 VAT1LQ9HCJ6 419 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 C6orf50Q9HD87 102 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 PSD3Q9NYI0 1048 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 VPS18Q9P253 973 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 EIF3CLB5ME19 914 aaKnown RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 TUBBP07437 444 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 BTDP43251 543 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 CYP27A1Q02318 531 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 GRAPQ13588 217 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 NEDD1Q8NHV4 660 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 GRAPLQ8TC17 118 aaPredicted RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 TBCKQ8TEA7 893 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 PIGSQ96S52 555 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 EIF3CQ99613 913 aaKnown RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 TMEM260Q9NX78 707 aa18.6■□□□□ 0.57
RPN1-201ENST00000296255 BIN2Q9UBW5 565 aaPredicted RBP18.6■□□□□ 0.57
RPN1-201ENST00000296255 CYLC1P35663 651 aaPredicted RBP18.59■□□□□ 0.57
RPN1-201ENST00000296255 FAM114A1Q8IWE2 563 aa18.59■□□□□ 0.57
RPN1-201ENST00000296255 CCDC47Q96A33 483 aaKnown RBP18.59■□□□□ 0.57
RPN1-201ENST00000296255 RRP36Q96EU6 259 aaKnown RBP18.59■□□□□ 0.57
RPN1-201ENST00000296255 ERGIC2Q96RQ1 377 aa18.59■□□□□ 0.57
RPN1-201ENST00000296255 ZNHIT6Q9NWK9 470 aaKnown RBP18.59■□□□□ 0.57
RPN1-201ENST00000296255 ZNF263O14978 683 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 KRT86O43790 486 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.57
RPN1-201ENST00000296255 LDHCP07864 332 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 GNA11P29992 359 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 ZNF804AQ7Z570 1209 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 CCDC170Q8IYT3 715 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 CEP95Q96GE4 821 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 CAPZA3Q96KX2 299 aa18.58■□□□□ 0.57
RPN1-201ENST00000296255 PCMTD1Q96MG8 357 aaPredicted RBP18.58■□□□□ 0.57
RPN1-201ENST00000296255 PURBQ96QR8 312 aaKnown RBP18.58■□□□□ 0.57
RPN1-201ENST00000296255 LMAN1P49257 510 aa18.58■□□□□ 0.56
RPN1-201ENST00000296255 GRB10Q13322 594 aa18.58■□□□□ 0.56
RPN1-201ENST00000296255 COBLL1Q53SF7 1204 aa18.58■□□□□ 0.56
RPN1-201ENST00000296255 SLC39A2Q9NP94 309 aa18.58■□□□□ 0.56
RPN1-201ENST00000296255 BLOC1S4Q9NUP1 217 aa18.58■□□□□ 0.56
RPN1-201ENST00000296255 FAN1Q9Y2M0 1017 aa18.58■□□□□ 0.56
RPN1-201ENST00000296255 RTCBQ9Y3I0 505 aaKnown RBP18.58■□□□□ 0.56
RPN1-201ENST00000296255 A0A1W2PQJ5 194 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 USP17L5A8MUK1 530 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 EDIL3O43854 480 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 PLEKP08567 350 aaPredicted RBP18.57■□□□□ 0.56
RPN1-201ENST00000296255 TXKP42681 527 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 FIGNQ5HY92 759 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 CENPPQ6IPU0 288 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 EHBP1Q8NDI1 1231 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 MTMR9Q96QG7 549 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 ZNF287Q9HBT7 754 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 GPR75-ASB3A0A0A6YYF3 556 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 PDE2AO00408 941 aaPredicted RBP18.57■□□□□ 0.56
RPN1-201ENST00000296255 ZNF185O15231 689 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 CDK17Q00537 523 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 AMPD3Q01432 767 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 CNNM4Q6P4Q7 775 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 TEX11Q8IYF3 940 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 REXO1Q8N1G1 1221 aaKnown RBP18.57■□□□□ 0.56
RPN1-201ENST00000296255 PNMA5Q96PV4 448 aa18.57■□□□□ 0.56
RPN1-201ENST00000296255 MYMKA6NI61 221 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 EPHB6O15197 1021 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 GPSM2P81274 684 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 SOGA3Q5TF21 947 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 KRT26Q7Z3Y9 468 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 CALML4Q96GE6 196 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 SEC63Q9UGP8 760 aaKnown RBP18.56■□□□□ 0.56
RPN1-201ENST00000296255 BTAF1O14981 1849 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 MACROD2A1Z1Q3 448 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 PPP1R2P41236 205 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 ZSCAN26Q16670 478 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
RPN1-201ENST00000296255 SLC37A4O43826 429 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 SMARCA1P28370 1054 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 NOVP48745 357 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 VAV2P52735 878 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 RHBDL3P58872 404 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 C15orf52Q6ZUT6 534 aaKnown RBP18.55■□□□□ 0.56
RPN1-201ENST00000296255 SV2BQ7L1I2 683 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 CD209Q9NNX6 404 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 CCNL1Q9UK58 526 aaPredicted RBP18.55■□□□□ 0.56
RPN1-201ENST00000296255 ESYT2A0FGR8 921 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 TULP2O00295 520 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 IPO7O95373 1038 aaKnown RBP18.55■□□□□ 0.56
RPN1-201ENST00000296255 VWA3BQ502W6 1294 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 FKBP15Q5T1M5 1219 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 SMCR8Q8TEV9 937 aaPredicted RBP18.55■□□□□ 0.56
RPN1-201ENST00000296255 CCDC102AQ96A19 550 aa18.55■□□□□ 0.56
RPN1-201ENST00000296255 RIOX1Q9H6W3 641 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms