RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 MFSD4BQ5TF39 518 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 KRT87PA6NCN2 255 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 F5H423 210 aaPredicted RBP13.52□□□□□ -0.24
SLX4-201ENST00000294008 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.24
SLX4-201ENST00000294008 C2CD5Q86YS7 1000 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 MEIS3Q99687 375 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 LRRC4Q9HBW1 653 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 NRBP2Q9NSY0 501 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 SCOCQ9UIL1 159 aa13.52□□□□□ -0.24
SLX4-201ENST00000294008 CAVIN2O95810 425 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 SDSP20132 328 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 SLC26A7Q8TE54 656 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 ZNF594Q96JF6 807 aaPredicted RBP13.52□□□□□ -0.25
SLX4-201ENST00000294008 ATP8B3O60423 1300 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 KRIT1O00522 736 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 ORC4O43929 436 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 E2F6O75461 281 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 ART3Q13508 389 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 SCARA5Q6ZMJ2 495 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 SLF1Q9BQI6 1058 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.25
SLX4-201ENST00000294008 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 ODR4Q5SWX8 454 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 DCAF15Q66K64 600 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 C11orf74Q86VG3 221 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 GRK7Q8WTQ7 553 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 IFIH1Q9BYX4 1025 aaKnown RBP13.52□□□□□ -0.25
SLX4-201ENST00000294008 CASS4Q9NQ75 786 aa13.52□□□□□ -0.25
SLX4-201ENST00000294008 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 TECP42680 631 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 SLFN5Q08AF3 891 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 C16orf72Q14CZ0 275 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 BICC1Q9H694 974 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 TLK1Q9UKI8 766 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 DRP2Q13474 957 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 AARS2Q5JTZ9 985 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 LRRC8CQ8TDW0 803 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 CHURC1Q8WUH1 139 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 DYRK4Q9NR20 520 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 TFDP1Q14186 410 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 CDC37L1Q7L3B6 337 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 SIX6OS1Q8N1H7 587 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 PHKBQ93100 1093 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 DDHD2O94830 711 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 ASMTLO95671 621 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 TRIM27P14373 513 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 ALDH1B1P30837 517 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 C1orf131Q8NDD1 294 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 PRIMPOLQ96LW4 560 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 USP21Q9UK80 565 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 DTNBO60941 627 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 CREB3L3Q68CJ9 461 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 SCN4BQ8IWT1 228 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 CMTR1Q8N1G2 835 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 PSMC1P62191 440 aaKnown RBP13.51□□□□□ -0.25
SLX4-201ENST00000294008 CCNA1P78396 465 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 MYL5Q02045 173 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 CDO1Q16878 200 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 COPRSQ9NQ92 184 aa13.51□□□□□ -0.25
SLX4-201ENST00000294008 F8W8V4 182 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 SF3B3Q15393 1217 aaKnown RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 PLEKHM3Q6ZWE6 761 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 ARMC9Q7Z3E5 817 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 KCNJ14Q9UNX9 436 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 PI4K2BG5E9Z4 385 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 GCKP35557 465 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 NNMTP40261 264 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 LVRNQ6Q4G3 990 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 ARHGEF18Q6ZSZ5 1173 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLX4-201ENST00000294008 FAM49AQ9H0Q0 323 aaPredicted RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 SELENONQ9NZV5 590 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 ARHGAP6O43182 974 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 STAT1P42224 750 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 TFAMQ00059 246 aaKnown RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 PAK2Q13177 524 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 SIX5Q8N196 739 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 PHF21AQ96BD5 680 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 RASSF4Q9H2L5 321 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 IQANK1A0A1B0GTG1 560 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 WDR91A4D1P6 747 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 DEXIO95424 95 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 CHCHD3Q9NX63 227 aaKnown RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 ACEP12821 1306 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 SNX2O60749 519 aa13.5□□□□□ -0.25
SLX4-201ENST00000294008 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
SLX4-201ENST00000294008 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms