RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZBTB21Q9ULJ3 1066 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 CCDC151A5D8V7 595 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 PCP11498 1178 aaKnown RBP17.66■□□□□ 0.42
SMAD6-201ENST00000288840 RDH13Q8NBN7 331 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 LARP4BQ92615 738 aaKnown RBP17.66■□□□□ 0.42
SMAD6-201ENST00000288840 MLXIPQ9HAP2 919 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 ADAM21Q9UKJ8 722 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 CTDP1Q9Y5B0 961 aaPredicted RBP17.66■□□□□ 0.42
SMAD6-201ENST00000288840 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L15C9J2P7 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L13C9JLJ4 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L11C9JVI0 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L18D6R9N7 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L22D6RA61 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L17D6RBQ6 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L19D6RCP7 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L20D6RJB6 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L24Q0WX57 530 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 PRR16Q569H4 304 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 TTBK2Q6IQ55 1244 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 USP17L6PQ6QN14 398 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 CCDC155Q8N6L0 562 aa17.66■□□□□ 0.42
SMAD6-201ENST00000288840 RIN2Q8WYP3 895 aaPredicted RBP17.66■□□□□ 0.42
SMAD6-201ENST00000288840 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMAD6-201ENST00000288840 SEMA3EO15041 775 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 EIF4A3P38919 411 aaKnown RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 UBXN2AP68543 259 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 CASP8Q14790 479 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 WHAMMP3Q1A5X7 153 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 ZFYVE27Q5T4F4 411 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 ARL6IP4Q66PJ3 421 aaKnown RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 PNKPQ96T60 521 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 CD209Q9NNX6 404 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 LGALS16A8MUM7 142 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 ORC4O43929 436 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 TOM1O60784 492 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 PLEKP08567 350 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 CCNE1P24864 410 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 TBC1D10BQ4KMP7 808 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 GUCY2FP51841 1108 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 KCTD19Q17RG1 926 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 LSM14BQ9BX40 385 aaKnown RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
SMAD6-201ENST00000288840 PCDHB13Q9Y5F0 798 aa17.65■□□□□ 0.42
SMAD6-201ENST00000288840 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 RPS6KA4O75676 772 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 SASH3O75995 380 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 CT47A1Q5JQC4 288 aaPredicted RBP17.64■□□□□ 0.41
SMAD6-201ENST00000288840 GPBP1Q86WP2 473 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 DBNDD1Q9H9R9 158 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 BARHL2Q9NY43 387 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 SPATA31A1Q5TZJ5 1347 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
SMAD6-201ENST00000288840 NCK2O43639 380 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 EEF1GP26641 437 aaKnown RBP17.64■□□□□ 0.41
SMAD6-201ENST00000288840 KCNJ6P48051 423 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 PABPC4Q13310 644 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMAD6-201ENST00000288840 IL17AQ16552 155 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 RBM17Q96I25 401 aaKnown RBP17.64■□□□□ 0.41
SMAD6-201ENST00000288840 SAMM50Q9Y512 469 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.41
SMAD6-201ENST00000288840 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 SERPINB2P05120 415 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 GPSM2P81274 684 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 TRIM31Q9BZY9 425 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 GOPCQ9HD26 462 aa17.64■□□□□ 0.41
SMAD6-201ENST00000288840 ADSSL1Q8N142 457 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 ANAPC4Q9UJX5 808 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 DDX39AO00148 427 aaKnown RBP17.63■□□□□ 0.41
SMAD6-201ENST00000288840 FTCDO95954 541 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 GRAPQ13588 217 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 KCTD16Q68DU8 428 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 MYOCDQ8IZQ8 938 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 GRAPLQ8TC17 118 aaPredicted RBP17.63■□□□□ 0.41
SMAD6-201ENST00000288840 MMS19Q96T76 1030 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 NUP58Q9BVL2 599 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 FAM204AQ9H8W3 233 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 PANK4Q9NVE7 773 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 TBX2Q13207 712 aaPredicted RBP17.63■□□□□ 0.41
SMAD6-201ENST00000288840 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 DDX12PQ92771 950 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 SHISA4Q96DD7 197 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 NDST4Q9H3R1 872 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 PCDHA1Q9Y5I3 950 aa17.63■□□□□ 0.41
SMAD6-201ENST00000288840 C5P01031 1676 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 GOLGA6L10A6NI86 522 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 GDF11O95390 407 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 MCM3P25205 808 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 GRM4Q14833 912 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 FAM26FQ5R3K3 315 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 ADAT2Q7Z6V5 191 aaKnown RBP17.62■□□□□ 0.41
SMAD6-201ENST00000288840 TMEM139Q8IV31 216 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 TRIM9Q9C026 710 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms