RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 TMEM39BQ9GZU3 492 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 DNM3Q9UQ16 869 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 PRAMEF18Q5VWM3 479 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 HAUS3Q68CZ6 603 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 SARM1Q6SZW1 724 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 JMJD4Q9H9V9 463 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 GUCA1BQ9UMX6 200 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 LAD1O00515 517 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 FAM13AO94988 1023 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 NDUFB10O96000 172 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 TAL1P17542 331 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-201ENST00000277537 ZNF341Q9BYN7 854 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 ANO3Q9BYT9 981 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 FAM207AQ9NSI2 230 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-201ENST00000277537 RNF216Q9NWF9 866 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-201ENST00000277537 TOGARAM1Q9Y4F4 1720 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 DYNC1I1O14576 645 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
SEC16A-201ENST00000277537 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 ARGLU1Q9NWB6 273 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-201ENST00000277537 TUBE1Q9UJT0 475 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 CCPG1Q9ULG6 757 aa10.04□□□□□ -0.8
SEC16A-201ENST00000277537 GCOM1H8Y6P7 765 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 PPP1R12BO60237 982 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 POLR2MP0CAP2 368 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 CASP14P31944 242 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 PRCPP42785 496 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 SHROOM1Q2M3G4 852 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 DCAF17Q5H9S7 520 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 TEX33O43247 280 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 GAS7O60861 476 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 CDC25BP30305 580 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 AK8Q96MA6 479 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 ZDHHC15Q96MV8 337 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 NAP1L4Q99733 375 aaKnown RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 ZMYND12Q9H0C1 365 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 USP27XA6NNY8 438 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 ARHGAP6O43182 974 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 SHMT1P34896 483 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 STAT3P40763 770 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 ZNF569Q5MCW4 686 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-201ENST00000277537 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
SEC16A-201ENST00000277537 A0A087X0B3 334 aa10.02□□□□□ -0.8
SEC16A-201ENST00000277537 ECE1P42892 770 aa10.02□□□□□ -0.8
SEC16A-201ENST00000277537 MATR3P43243 847 aaKnown RBP eCLIP10.02□□□□□ -0.8
SEC16A-201ENST00000277537 NT5C2P49902 561 aa10.02□□□□□ -0.8
SEC16A-201ENST00000277537 RSBN1LQ6PCB5 846 aaPredicted RBP10.02□□□□□ -0.8
SEC16A-201ENST00000277537 POTEAQ6S8J7 498 aa10.02□□□□□ -0.8
SEC16A-201ENST00000277537 CRACR2AQ9BSW2 395 aa10.02□□□□□ -0.8
SEC16A-201ENST00000277537 ADAMTS7Q9UKP4 1686 aa10.02□□□□□ -0.8
SEC16A-201ENST00000277537 LTBP4Q8N2S1 1624 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 COPB1P53618 953 aaKnown RBP10.02□□□□□ -0.81
SEC16A-201ENST00000277537 FUT2Q10981 343 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 DACT2Q5SW24 774 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 VSTM4Q8IW00 320 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 CCDC42Q96M95 316 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 SPAG5Q96R06 1193 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 PANK4Q9NVE7 773 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
SEC16A-201ENST00000277537 ZNF70Q9UC06 446 aaPredicted RBP10.02□□□□□ -0.81
SEC16A-201ENST00000277537 ZNRF3Q9ULT6 936 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 COL16A1Q07092 1604 aaPredicted RBP10.02□□□□□ -0.81
SEC16A-201ENST00000277537 ERICH4A6NGS2 130 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 B4DLN1 442 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 USP8P40818 1118 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 RBL2Q08999 1139 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
SEC16A-201ENST00000277537 ACER1Q8TDN7 264 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 NT5C3AQ9H0P0 336 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
SEC16A-201ENST00000277537 TESPA1A2RU30 521 aaPredicted RBP10.01□□□□□ -0.81
SEC16A-201ENST00000277537 E9PMD0 336 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 FCER1AP12319 257 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 RASA3Q14644 834 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 MTERF4Q7Z6M4 381 aaKnown RBP10.01□□□□□ -0.81
SEC16A-201ENST00000277537 MYCT1Q8N699 235 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 MRPL44Q9H9J2 332 aaKnown RBP10.01□□□□□ -0.81
SEC16A-201ENST00000277537 NLRC4Q9NPP4 1024 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.01□□□□□ -0.81
SEC16A-201ENST00000277537 GAKO14976 1311 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 GOLGA6L9A6NEM1 432 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 hCG_1984214I3L0E3 225 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 GCNT3O95395 438 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 ARHGAP4P98171 946 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 KRT31Q15323 416 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 FAM26FQ5R3K3 315 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 MYOCDQ8IZQ8 938 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 ZNF713Q8N859 430 aaPredicted RBP10.01□□□□□ -0.81
SEC16A-201ENST00000277537 RDH13Q8NBN7 331 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 MYRIPQ8NFW9 859 aa10.01□□□□□ -0.81
SEC16A-201ENST00000277537 DCAF4Q8WV16 495 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms