RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 RAG1P15918 1043 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 MX1P20591 662 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 FPGSQ05932 587 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 TMEM240Q5SV17 173 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 TTBK2Q6IQ55 1244 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 TAPT1Q6NXT6 567 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 ANKRD35Q8N283 1001 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 USP38Q8NB14 1042 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 SLC43A3Q8NBI5 491 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 STAG1Q8WVM7 1258 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 GPATCH3Q96I76 525 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 RNPC3Q96LT9 517 aaKnown RBP10.64□□□□□ -0.71
TPM3-201ENST00000271850 NAPBQ9H115 298 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 ABHD16BQ9H3Z7 469 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 ACAD9Q9H845 621 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 PDGFCQ9NRA1 345 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
TPM3-201ENST00000271850 ELP1O95163 1332 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 A0A0D9SFI3 127 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 GRXCR1A8MXD5 290 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 PLA2G6O60733 806 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 SMPD1P17405 629 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 SLC1A4P43007 532 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 STAT2P52630 851 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 GRIN2CQ14957 1233 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 ZNF589Q86UQ0 364 aaPredicted RBP10.63□□□□□ -0.71
TPM3-201ENST00000271850 MAFAQ8NHW3 353 aaPredicted RBP10.63□□□□□ -0.71
TPM3-201ENST00000271850 FAM227BQ96M60 508 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 CYP39A1Q9NYL5 469 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 FBXO40Q9UH90 709 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
TPM3-201ENST00000271850 A0A0U1RQG5 324 aaPredicted RBP10.62□□□□□ -0.71
TPM3-201ENST00000271850 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 ARVCFO00192 962 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 ERC2O15083 957 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 ACRP10323 421 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 CSF2RAP15509 400 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 DNAJB2P25686 324 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
TPM3-201ENST00000271850 PDE4BQ07343 736 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 MFSD5Q6N075 450 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 CXCL17Q6UXB2 119 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 FAM160B2Q86V87 743 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 FBXO16Q8IX29 292 aaPredicted RBP10.62□□□□□ -0.71
TPM3-201ENST00000271850 MORC4Q8TE76 937 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 TRERF1Q96PN7 1200 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
TPM3-201ENST00000271850 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
TPM3-201ENST00000271850 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
TPM3-201ENST00000271850 DCDC2CA8MYV0 355 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 NFIBO00712 420 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 ORC4O43929 436 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 ALAS1P13196 640 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 CYP2C18P33260 490 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 SLC16A2P36021 539 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 PDE1AP54750 535 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 DSG2Q14126 1118 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 GNASQ5JWF2 1037 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 RCSD1Q6JBY9 416 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 BTNL9Q6UXG8 535 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 EEPD1Q7L9B9 569 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 TLK2Q86UE8 772 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 PBX4Q9BYU1 374 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 PPP1R12CQ9BZL4 782 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 PRDM6Q9NQX0 595 aa10.61□□□□□ -0.71
TPM3-201ENST00000271850 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 TSPY2A6NKD2 308 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 FGAP02671 866 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 FDX1P10109 184 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 FOSL2P15408 326 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 PSMC6P62333 389 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 ALX1Q15699 326 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 SLC30A10Q6XR72 485 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 ZNF365Q70YC5 407 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
TPM3-201ENST00000271850 CHURC1Q8WUH1 139 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 TMEM47Q9BQJ4 181 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 WNT8AQ9H1J5 351 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
TPM3-201ENST00000271850 FRMPD2Q68DX3 1309 aaPredicted RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 GBF1Q92538 1859 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 B4GALT4O60513 344 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 RANBP6O60518 1105 aaKnown RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 ICAM1P05362 532 aa10.59□□□□□ -0.71
TPM3-201ENST00000271850 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 NMIQ13287 307 aaPredicted RBP10.59□□□□□ -0.71
TPM3-201ENST00000271850 ADGRE1Q14246 886 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms