RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 ZNF384Q8TF68 577 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 NEUROD6Q96NK8 337 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 PRR14Q9BWN1 585 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 C11orf16Q9NQ32 467 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 DDX19AQ9NUU7 478 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 TMEM39AQ9NV64 488 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 GNL3LQ9NVN8 582 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 PAG1Q9NWQ8 432 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 DBNLQ9UJU6 430 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 DENND2AQ9ULE3 1009 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 TACC3Q9Y6A5 838 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 IVNS1ABPQ9Y6Y0 642 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L10C9JJH3 530 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 KIAA0355O15063 1070 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 ZNF500O60304 480 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 OFD1O75665 1012 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 CAVIN2O95810 425 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 CCNA1P78396 465 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 MECOMQ03112 1051 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 ADCK5Q3MIX3 580 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 FOXD4L6Q3SYB3 417 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 ZSCAN25Q6NSZ9 544 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 FOXD4L3Q6VB84 417 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 TRIM67Q6ZTA4 783 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 ATG9AQ7Z3C6 839 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 EMID1Q96A84 441 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 LENG1Q96BZ8 264 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 NKX2-4Q9H2Z4 354 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 BTBD7Q9P203 1132 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 TPCN1Q9ULQ1 816 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 ZKSCAN5Q9Y2L8 839 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 LAMA4Q16363 1823 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 WDFY4Q6ZS81 3184 aa8.14□□□□□ -1.11
SMARCE1-201ENST00000264640 MCM3APO60318 1980 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 MYH8P13535 1937 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 MYH15Q9Y2K3 1946 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 GPR75-ASB3A0A0A6YYF3 556 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 C19orf81C9J6K1 198 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 RNF113AO15541 343 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 SEPT4O43236 478 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 IGHA2P01877 340 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 ASNSP08243 561 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 HOXC6P09630 235 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 ACRP10323 421 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 CPA1P15085 419 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 TTC39AQ5SRH9 613 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 C1orf53Q5VUE5 145 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 CCDC102BQ68D86 513 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 Q6ZUG5 572 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 DHX32Q7L7V1 743 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 DPP9Q86TI2 863 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 GTF3C2Q8WUA4 911 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 GTF3C6Q969F1 213 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 SPATA32Q96LK8 384 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 ZNF396Q96N95 335 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 FEZ1Q99689 392 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 ZBTB21Q9ULJ3 1066 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 PHF24Q9UPV7 400 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 YBX2Q9Y2T7 364 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 RABGAP1Q9Y3P9 1069 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 BRWD1Q9NSI6 2320 aa8.13□□□□□ -1.11
SMARCE1-201ENST00000264640 A0A1W2PQ45 241 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 A0A1W2PQY0 241 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 SEMA3EO15041 775 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 DHX16O60231 1041 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 PFKFB2O60825 505 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 LARGE1O95461 756 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 PGK1P00558 417 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 ADORA2AP29274 412 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 DNM1Q05193 864 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 TMEM240Q5SV17 173 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 NAA16Q6N069 864 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 PI16Q6UXB8 463 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 C16orf59Q7L2K0 433 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 ZNF589Q86UQ0 364 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 TEX11Q8IYF3 940 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 NECAB1Q8N987 351 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 SLC44A5Q8NCS7 719 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 SH3RF3Q8TEJ3 882 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 NUP62CLQ9H1M0 184 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 XPNPEP3Q9NQH7 507 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 HERC5Q9UII4 1024 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms