RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 BABAM1Q9NWV8 329 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 STXBP3O00186 592 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 N4BP3O15049 544 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 MPP3Q13368 585 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 PDIA6Q15084 440 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 PUM3Q15397 648 aaKnown RBP9.23□□□□□ -0.93
LDB3-201ENST00000263066 TBC1D25Q3MII6 688 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 NIM1KQ8IY84 436 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 UIMC1Q96RL1 719 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 ADAMTS7Q9UKP4 1686 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 GBP1P32455 592 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 LSP1P33241 339 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CCDC122Q5T0U0 273 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CCDC102BQ68D86 513 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CWF19L1Q69YN2 538 aaKnown RBP9.22□□□□□ -0.93
LDB3-201ENST00000263066 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 AMIGO3Q86WK7 504 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 MICU3Q86XE3 530 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 PGBD1Q96JS3 809 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 GORASP1Q9BQQ3 440 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 YIPF2Q9BWQ6 316 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 UBXN6Q9BZV1 441 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 HDAC6Q9UBN7 1215 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 KDRP35968 1356 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 ZNF213O14771 459 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 MARCKSP29966 332 aaPredicted RBP9.22□□□□□ -0.93
LDB3-201ENST00000263066 MTF1Q14872 753 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CCDC178Q5BJE1 867 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CCDC43Q96MW1 224 aaKnown RBP9.22□□□□□ -0.93
LDB3-201ENST00000263066 SCOCQ9UIL1 159 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 SAR1BQ9Y6B6 198 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 TLDC2A0PJX2 215 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 M0R2C6 588 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 JAK2O60674 1132 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 PFKFB2O60825 505 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 GYS1P13807 737 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 DPEP1P16444 411 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 ALDH1B1P30837 517 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
LDB3-201ENST00000263066 ZNF444Q8N0Y2 327 aaPredicted RBP9.22□□□□□ -0.93
LDB3-201ENST00000263066 TMCO5AQ8N6Q1 288 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 C17orf50Q8WW18 174 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 DTNBP1Q96EV8 351 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 DLGAP2Q9P1A6 1054 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 DBNLQ9UJU6 430 aaKnown RBP9.22□□□□□ -0.93
LDB3-201ENST00000263066 BLOC1S6Q9UL45 172 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 C15orf41Q9Y2V0 281 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 C2CD2Q9Y426 696 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 NFAT5O94916 1531 aa9.22□□□□□ -0.93
LDB3-201ENST00000263066 KDM6AO15550 1401 aaPredicted RBP9.21□□□□□ -0.93
LDB3-201ENST00000263066 RPAP1Q9BWH6 1393 aaPredicted RBP9.21□□□□□ -0.93
LDB3-201ENST00000263066 MACROD2A1Z1Q3 448 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 FAM196BA6NMK8 535 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 CAPN15O75808 1086 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 MYCP01106 439 aaPredicted RBP9.21□□□□□ -0.93
LDB3-201ENST00000263066 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.93
LDB3-201ENST00000263066 IMPDH2P12268 514 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 IDEP14735 1019 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 DALRD3Q5D0E6 543 aaKnown RBP9.21□□□□□ -0.93
LDB3-201ENST00000263066 C16orf87Q6PH81 154 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 MAIP1Q8WWC4 291 aa9.21□□□□□ -0.93
LDB3-201ENST00000263066 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 B4DLN1 442 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 SRGAP2O75044 1071 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 PPP1R37O75864 691 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 ATP4AP20648 1035 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 SYKP43405 635 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 SLC7A5Q01650 507 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 MAP7Q14244 749 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 TMEM154Q6P9G4 183 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 TGFBRAP1Q8WUH2 860 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 KLHL29Q96CT2 875 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.94
LDB3-201ENST00000263066 EPN3Q9H201 632 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 GALNT8Q9NY28 637 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 CHMP2BQ9UQN3 213 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 FAM208AQ9UK61 1670 aaKnown RBP9.21□□□□□ -0.94
LDB3-201ENST00000263066 ABCC4O15439 1325 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 UBN2Q6ZU65 1347 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 STX17P56962 302 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 CUL4BQ13620 913 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 CCHCR1Q8TD31 782 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 IFT74Q96LB3 600 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 TRAIPQ9BWF2 469 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 DACH1Q9UI36 760 aa9.21□□□□□ -0.94
LDB3-201ENST00000263066 ADCY9O60503 1353 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 H0Y3Z8 333 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 LSM1O15116 133 aaKnown RBP9.2□□□□□ -0.94
LDB3-201ENST00000263066 PDE8BO95263 885 aa9.2□□□□□ -0.94
LDB3-201ENST00000263066 TBC1D10BQ4KMP7 808 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms