RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 RNASE9P60153 205 aaKnown RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 SPA17Q15506 151 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 E4F1Q66K89 784 aaPredicted RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 ZNF579Q8NAF0 562 aaKnown RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 JMJD4Q9H9V9 463 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 NPHP3-ACAD11A0A0J9YXS1 232 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 FAM193AP78312 1265 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 SYCP1Q15431 976 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 ZNF771Q7L3S4 317 aaPredicted RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 LARP4BQ92615 738 aaKnown RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 TOGARAM1Q9Y4F4 1720 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 LRP6O75581 1613 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 PNMA6FA0A0J9YX94 578 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 POTEB3A0JP26 581 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 POTECB2RU33 542 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 ENC1O14682 589 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 BMP3P12645 472 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 STK4Q13043 487 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 POTEBQ6S5H4 581 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 PIGOQ8TEQ8 1089 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 ITGB4P16144 1822 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 IL17AQ16552 155 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 GPATCH4Q5T3I0 446 aaKnown RBP16.87■□□□□ 0.29
TIMP2-201ENST00000262768 SYCP3Q8IZU3 236 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 TRIML1Q8N9V2 468 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 SMCR8Q8TEV9 937 aaPredicted RBP16.87■□□□□ 0.29
TIMP2-201ENST00000262768 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 ATRNO75882 1429 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 RCAN1P53805 252 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 CYP27A1Q02318 531 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 ZNF543Q08ER8 600 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
TIMP2-201ENST00000262768 ACER1Q8TDN7 264 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
TIMP2-201ENST00000262768 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
TIMP2-201ENST00000262768 ZBTB5O15062 677 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 TUBGCP2Q9BSJ2 902 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 ABCC6O95255 1503 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 DPYDQ12882 1025 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 ZNF658Q5TYW1 1059 aaPredicted RBP16.86■□□□□ 0.29
TIMP2-201ENST00000262768 POTEFA5A3E0 1075 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 KIF2AO00139 706 aaPredicted RBP16.86■□□□□ 0.29
TIMP2-201ENST00000262768 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 ERCC5P28715 1186 aaPredicted RBP16.86■□□□□ 0.29
TIMP2-201ENST00000262768 CDC25BP30305 580 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 POTEGQ6S5H5 508 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 CNOT6LQ96LI5 555 aaKnown RBP16.86■□□□□ 0.29
TIMP2-201ENST00000262768 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 SWAP70Q9UH65 585 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
TIMP2-201ENST00000262768 PSMD14O00487 310 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 NDUFB10O96000 172 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 DPEP1P16444 411 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 PPARDQ03181 441 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 CNGA4Q8IV77 575 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 POLD1P28340 1107 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 TNNT3P45378 269 aaPredicted RBP16.85■□□□□ 0.29
TIMP2-201ENST00000262768 ETF1P62495 437 aaKnown RBP16.85■□□□□ 0.29
TIMP2-201ENST00000262768 TMC4Q7Z404 712 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 DDX12PQ92771 950 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 GDAP1L1Q96MZ0 367 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
TIMP2-201ENST00000262768 RAPGEF1Q13905 1077 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 ERMNQ8TAM6 284 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 NUDT12Q9BQG2 462 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 ANO3Q9BYT9 981 aa16.85■□□□□ 0.29
TIMP2-201ENST00000262768 XIRP1Q702N8 1843 aaKnown RBP16.85■□□□□ 0.29
TIMP2-201ENST00000262768 SHMT1P34896 483 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 CTTNQ14247 550 aaKnown RBP16.84■□□□□ 0.29
TIMP2-201ENST00000262768 RRAGAQ7L523 313 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 GCNT3O95395 438 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
TIMP2-201ENST00000262768 SPAG5Q96R06 1193 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 BICDL2A1A5D9 508 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 KLK7P49862 253 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
TIMP2-201ENST00000262768 CDAN1Q8IWY9 1227 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 SPZ1Q9BXG8 430 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 ZNF341Q9BYN7 854 aa16.84■□□□□ 0.29
TIMP2-201ENST00000262768 CLIC2O15247 247 aa16.83■□□□□ 0.29
TIMP2-201ENST00000262768 FLOT1O75955 427 aa16.83■□□□□ 0.29
TIMP2-201ENST00000262768 PMS1P54277 932 aaKnown RBP16.83■□□□□ 0.29
TIMP2-201ENST00000262768 SLC35G1Q2M3R5 365 aa16.83■□□□□ 0.29
TIMP2-201ENST00000262768 CCDC93Q567U6 631 aa16.83■□□□□ 0.29
TIMP2-201ENST00000262768 SPTLC3Q9NUV7 552 aa16.83■□□□□ 0.29
TIMP2-201ENST00000262768 STRIP1Q5VSL9 837 aa16.83■□□□□ 0.28
TIMP2-201ENST00000262768 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
TIMP2-201ENST00000262768 TBC1D5Q92609 795 aa16.83■□□□□ 0.28
TIMP2-201ENST00000262768 MAP7D2Q96T17 732 aa16.83■□□□□ 0.28
TIMP2-201ENST00000262768 ZMYND12Q9H0C1 365 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms