RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 HSP90B2PQ58FF3 399 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 GIMAP8Q8ND71 665 aaPredicted RBP25.26■■□□□ 1.63
MCF2L-201ENST00000261963 AK8Q96MA6 479 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 CRAMP1Q96RY5 1269 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 UBA5Q9GZZ9 404 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 CORO7P57737 925 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 ERVK-24P63145 666 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 CABP7Q86V35 215 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 ANKRD20A12PQ8NF67 263 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 PNKPQ96T60 521 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 ABCB6Q9NP58 842 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 LZTFL1Q9NQ48 299 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 ABHD10Q9NUJ1 306 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 SEC63Q9UGP8 760 aaKnown RBP25.26■■□□□ 1.63
MCF2L-201ENST00000261963 MYH1P12882 1939 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 KLRG2A4D1S0 409 aaPredicted RBP25.25■■□□□ 1.63
MCF2L-201ENST00000261963 POLRMTO00411 1230 aaKnown RBP25.25■■□□□ 1.63
MCF2L-201ENST00000261963 NEK8Q86SG6 692 aa25.25■■□□□ 1.63
MCF2L-201ENST00000261963 FAM71BQ8TC56 605 aa25.25■■□□□ 1.63
MCF2L-201ENST00000261963 RIOX1Q9H6W3 641 aa25.25■■□□□ 1.63
MCF2L-201ENST00000261963 CDC23Q9UJX2 597 aa25.25■■□□□ 1.63
MCF2L-201ENST00000261963 GTF2IP78347 998 aa25.25■■□□□ 1.63
MCF2L-201ENST00000261963 PLIN4Q96Q06 1357 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 LTBP1Q14766 1721 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 PDHBP11177 359 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 GABPAQ06546 454 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 PAXIP1Q6ZW49 1069 aaPredicted RBP25.24■■□□□ 1.63
MCF2L-201ENST00000261963 TBCKQ8TEA7 893 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 CUEDC2Q9H467 287 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 SOGA3Q5TF21 947 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 LRRC31Q6UY01 552 aa25.24■■□□□ 1.63
MCF2L-201ENST00000261963 ESYT2A0FGR8 921 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TUBB2AQ13885 445 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 CCDC102AQ96A19 550 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TUBB2BQ9BVA1 445 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 MAGEF1Q9HAY2 307 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 MTMR4Q9NYA4 1195 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 BIN2Q9UBW5 565 aaPredicted RBP25.23■■□□□ 1.63
MCF2L-201ENST00000261963 AFF2P51816 1311 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 FRMPD2Q68DX3 1309 aaPredicted RBP25.23■■□□□ 1.63
MCF2L-201ENST00000261963 UBXN1Q04323 297 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 SEMA3FQ13275 785 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TRIM14Q14142 442 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TTI2Q6NXR4 508 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TMTC1Q8IUR5 882 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 MMTAG2Q9BU76 263 aaKnown RBP25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TRIM9Q9C026 710 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 GBP3Q9H0R5 595 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 TMEM260Q9NX78 707 aa25.23■■□□□ 1.63
MCF2L-201ENST00000261963 PICALMQ13492 652 aa25.22■■□□□ 1.63
MCF2L-201ENST00000261963 REXO1Q8N1G1 1221 aaKnown RBP25.22■■□□□ 1.63
MCF2L-201ENST00000261963 ACRBPQ8NEB7 543 aa25.22■■□□□ 1.63
MCF2L-201ENST00000261963 NUP88Q99567 741 aaPredicted RBP25.22■■□□□ 1.63
MCF2L-201ENST00000261963 SUGCTQ9HAC7 445 aa25.22■■□□□ 1.63
MCF2L-201ENST00000261963 CASP8Q14790 479 aa25.22■■□□□ 1.63
MCF2L-201ENST00000261963 MEX3CQ5U5Q3 659 aaKnown RBP25.22■■□□□ 1.63
MCF2L-201ENST00000261963 ACBD3Q9H3P7 528 aa25.22■■□□□ 1.63
MCF2L-201ENST00000261963 THAP9Q9H5L6 903 aa25.22■■□□□ 1.63
MCF2L-201ENST00000261963 DDX4Q9NQI0 724 aaKnown RBP25.22■■□□□ 1.63
MCF2L-201ENST00000261963 IGKV6D-41A0A0C4DH26 115 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 LGALS16A8MUM7 142 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 PSMA7O14818 248 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 KIF5CO60282 957 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 AKR1B1P15121 316 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 TECP42680 631 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 LRRC47Q8N1G4 583 aaKnown RBP25.21■■□□□ 1.63
MCF2L-201ENST00000261963 CERS5Q8N5B7 392 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 ZNF507Q8TCN5 953 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 DEF6Q9H4E7 631 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 LRRC37AA6NMS7 1700 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 RIMBP2O15034 1052 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 EEF1GP26641 437 aaKnown RBP25.21■■□□□ 1.63
MCF2L-201ENST00000261963 KRT9P35527 623 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 STIM1Q13586 685 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 CLEC10AQ8IUN9 316 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 MB21D1Q8N884 522 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 TRIM47Q96LD4 638 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 DUSP9Q99956 384 aaKnown RBP25.21■■□□□ 1.63
MCF2L-201ENST00000261963 NCAPGQ9BPX3 1015 aa25.21■■□□□ 1.63
MCF2L-201ENST00000261963 FOCADQ5VW36 1801 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 PPEF1O14829 653 aaPredicted RBP25.2■■□□□ 1.62
MCF2L-201ENST00000261963 EDIL3O43854 480 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 SNHG28P0DPA3 235 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 SLC27A3Q5K4L6 730 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 SP8Q8IXZ3 490 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 DRC1Q96MC2 740 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 MYCBPQ99417 103 aaPredicted RBP25.2■■□□□ 1.62
MCF2L-201ENST00000261963 C7orf25Q9BPX7 421 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 CYP26C1Q6V0L0 522 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 TEX2Q8IWB9 1127 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 MED4Q9NPJ6 270 aa25.2■■□□□ 1.62
MCF2L-201ENST00000261963 TTF2Q9UNY4 1162 aaKnown RBP25.2■■□□□ 1.62
MCF2L-201ENST00000261963 ABL1P00519 1130 aa25.19■■□□□ 1.62
MCF2L-201ENST00000261963 COA7Q96BR5 231 aa25.19■■□□□ 1.62
MCF2L-201ENST00000261963 DHTKD1Q96HY7 919 aaPredicted RBP25.19■■□□□ 1.62
MCF2L-201ENST00000261963 MTMR9Q96QG7 549 aa25.19■■□□□ 1.62
MCF2L-201ENST00000261963 F8W031 263 aaPredicted RBP25.18■■□□□ 1.62
MCF2L-201ENST00000261963 hCG_1984214I3L0E3 225 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 PHACTR2O75167 634 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms