RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CCDC194A0A1B0GVG4 234 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 IGHMBP2P38935 993 aaKnown RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 IRAK1P51617 712 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 IFIH1Q9BYX4 1025 aaKnown RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 RBM12Q9NTZ6 932 aaKnown RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 LAMB2P55268 1798 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 BAZ2AQ9UIF9 1905 aaKnown RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 CYP19A1P11511 503 aaPredicted RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 EIF4A3P38919 411 aaKnown RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 TXNRD1Q16881 649 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 KLHL7Q8IXQ5 586 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 FAM169AQ9Y6X4 670 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 LGALS16A8MUM7 142 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 KRT86O43790 486 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 KIF5AQ12840 1032 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 DIXDC1Q155Q3 683 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 CCNI2Q6ZMN8 369 aaPredicted RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 SECISBP2LQ93073 1101 aaKnown RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 FERMT2Q96AC1 680 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 RNF41Q9H4P4 317 aaPredicted RBP14.48□□□□□ -0.09
SNX1-201ENST00000261889 DISC1Q9NRI5 854 aa14.48□□□□□ -0.09
SNX1-201ENST00000261889 BCCIPQ9P287 314 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNX1-201ENST00000261889 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 TXKP42681 527 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 MAGEA9P43362 315 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 CARSP49589 748 aaKnown RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 MNAT1P51948 309 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 RNF187Q5TA31 235 aaPredicted RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 FAM196AQ6ZSG2 479 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 TXNRD3Q86VQ6 643 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 ADSSL1Q8N142 457 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 TNFRSF25Q93038 417 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 DUSP9Q99956 384 aaKnown RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 ZHX3Q9H4I2 956 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 PDE6BP35913 854 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 IRX3P78415 501 aaPredicted RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 TFAP4Q01664 338 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 SLC35G1Q2M3R5 365 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 TTMPQ5BVD1 217 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 ICE2Q659A1 982 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 DTHD1Q6ZMT9 781 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 DDX42Q86XP3 938 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNX1-201ENST00000261889 UBA5Q9GZZ9 404 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 GBP3Q9H0R5 595 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 ZNHIT6Q9NWK9 470 aaKnown RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 TMEM260Q9NX78 707 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 PRPF3O43395 683 aaKnown RBP14.47□□□□□ -0.09
SNX1-201ENST00000261889 PPFIA4O75335 1185 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 CORO7P57737 925 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNX1-201ENST00000261889 HAUS4Q9H6D7 363 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 PSD3Q9NYI0 1048 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 ARHGAP20Q9P2F6 1191 aa14.47□□□□□ -0.09
SNX1-201ENST00000261889 SLC1A4P43007 532 aa14.46□□□□□ -0.09
SNX1-201ENST00000261889 PAXIP1Q6ZW49 1069 aaPredicted RBP14.46□□□□□ -0.09
SNX1-201ENST00000261889 NELFCDQ8IXH7 590 aa14.46□□□□□ -0.09
SNX1-201ENST00000261889 EXOC1Q9NV70 894 aa14.46□□□□□ -0.09
SNX1-201ENST00000261889 BIN2Q9UBW5 565 aaPredicted RBP14.46□□□□□ -0.09
SNX1-201ENST00000261889 H0YHG0 523 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 PSMA7O14818 248 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 GUCY2DQ02846 1103 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 SPA17Q15506 151 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 ALX1Q15699 326 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 CELF1Q92879 486 aaKnown RBP14.46□□□□□ -0.1
SNX1-201ENST00000261889 MTMR8Q96EF0 704 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 CCDC43Q96MW1 224 aaKnown RBP14.46□□□□□ -0.1
SNX1-201ENST00000261889 RIOK1Q9BRS2 568 aaKnown RBP14.46□□□□□ -0.1
SNX1-201ENST00000261889 CAPS2Q9BXY5 557 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 CAPN7Q9Y6W3 813 aa14.46□□□□□ -0.1
SNX1-201ENST00000261889 LRRC53A6NM62 1247 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 NDUFAB1O14561 156 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 GLI1P08151 1106 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 ADAT2Q7Z6V5 191 aaKnown RBP14.45□□□□□ -0.1
SNX1-201ENST00000261889 KSR1Q8IVT5 923 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 BLIDQ8IZY5 108 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 RUFY1Q96T51 708 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 PACSIN1Q9BY11 444 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 ACBD3Q9H3P7 528 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 POTEMA6NI47 508 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 PSMD14O00487 310 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 NBPF9Q3BBW0 867 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 TADA2BQ86TJ2 420 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 CREG2Q8IUH2 290 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 TSPYL1Q9H0U9 437 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 BCS1LQ9Y276 419 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 HYOU1Q9Y4L1 999 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 ERLIN2O94905 339 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 LLGL1Q15334 1064 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 GRIK5Q16478 980 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 TTI2Q6NXR4 508 aa14.45□□□□□ -0.1
SNX1-201ENST00000261889 PPANQ9NQ55 473 aaKnown RBP14.45□□□□□ -0.1
SNX1-201ENST00000261889 KLRC4O43908 158 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 MECOMQ03112 1051 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 USP17L2Q6R6M4 530 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 KIRREL3Q8IZU9 778 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 ZNF507Q8TCN5 953 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 TRIM31Q9BZY9 425 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms