RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RASIP1Q5U651 963 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 MFSD14BQ5SR56 506 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 MYSM1Q5VVJ2 828 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 IP6K1Q92551 441 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 TSC1Q92574 1164 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 ANLNQ9NQW6 1124 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 PCDHB4Q9Y5E5 795 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 ZSCAN10Q96SZ4 725 aaPredicted RBP15.58■□□□□ 0.08
CUX2-201ENST00000261726 NBPF3Q9H094 633 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 IFNAR2P48551 515 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 Q3C1V9 767 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 SLFN12Q8IYM2 578 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 ZNF653Q96CK0 615 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.08
CUX2-201ENST00000261726 PDCD2Q16342 344 aaPredicted RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 IQCDQ96DY2 449 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 ORC6Q9Y5N6 252 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 NPATQ14207 1427 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 NSFP46459 744 aaKnown RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 SNX1Q13596 522 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 MESDQ14696 234 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 KCTD16Q68DU8 428 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 CCDC51Q96ER9 411 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 RPGRIP1Q96KN7 1286 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 RRAGDQ9NQL2 400 aaPredicted RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 BCS1LQ9Y276 419 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 LMTK3Q96Q04 1460 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 GNL1P36915 607 aaPredicted RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 STX1BP61266 288 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 ADAM9Q13443 819 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 SDR42E1Q8WUS8 393 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 KRT82Q9NSB4 513 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 USP17L12C9JPN9 530 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 USP17L21D6R901 530 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 BRD3Q15059 726 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 CDC26Q8NHZ8 85 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 PPP2R2CQ9Y2T4 447 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 MRPL11Q9Y3B7 192 aaKnown RBP15.57■□□□□ 0.08
CUX2-201ENST00000261726 PASKQ96RG2 1323 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 ACTN1P12814 892 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 MYL7Q01449 175 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 DOK7Q18PE1 504 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 PLA2G4DQ86XP0 818 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 BCAS4Q8TDM0 211 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 TRIM4Q9C037 500 aa15.57■□□□□ 0.08
CUX2-201ENST00000261726 PNMA6EA0A0J9YXQ4 647 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 CYP4A11Q02928 519 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 SEPT9Q9UHD8 586 aaPredicted RBP15.56■□□□□ 0.08
CUX2-201ENST00000261726 TYW5A2RUC4 315 aaKnown RBP15.56■□□□□ 0.08
CUX2-201ENST00000261726 ALDH1B1P30837 517 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 POLR2BP30876 1174 aaKnown RBP15.56■□□□□ 0.08
CUX2-201ENST00000261726 GUCY2DQ02846 1103 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 RASSF7Q02833 373 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 GCKRQ14397 625 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 GJA10Q969M2 543 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 ZBTB41Q5SVQ8 909 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
CUX2-201ENST00000261726 FBXO11Q86XK2 927 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 EDC3Q96F86 508 aaKnown RBP15.56■□□□□ 0.08
CUX2-201ENST00000261726 EEF2KMTQ96G04 330 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 AKT3Q9Y243 479 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 RPSAP08865 295 aaKnown RBP15.56■□□□□ 0.08
CUX2-201ENST00000261726 ARPP19P56211 112 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 CCNYQ8ND76 341 aa15.56■□□□□ 0.08
CUX2-201ENST00000261726 USP19O94966 1318 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ZBBXA8MT70 800 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 OR52Z1P0C646 297 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 EHHADHQ08426 723 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ANKRD20A4Q4UJ75 823 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ANKRD20A8PQ5CZ79 823 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ANKRD20A2Q5SQ80 823 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ANKRD20A1Q5TYW2 823 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ABI1Q8IZP0 508 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ANKRD13CQ8N6S4 541 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 MIS12Q9H081 205 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 ME3Q16798 604 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 TBC1D22AQ8WUA7 517 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 TRPA1O75762 1119 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 CERKLQ49MI3 558 aaPredicted RBP15.55■□□□□ 0.08
CUX2-201ENST00000261726 RPN1P04843 607 aaKnown RBP15.55■□□□□ 0.08
CUX2-201ENST00000261726 SRGAP2BP0DMP2 458 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 DYNLT1P63172 113 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 UBXN2AP68543 259 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 SNCBQ16143 134 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 GPR162Q16538 588 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 SCYL3Q8IZE3 742 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 CLIC6Q96NY7 704 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 C19orf44Q9H6X5 657 aa15.55■□□□□ 0.08
CUX2-201ENST00000261726 SUDS3Q9H7L9 328 aaPredicted RBP15.55■□□□□ 0.08
CUX2-201ENST00000261726 APBA3O96018 575 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 HSPA2P54652 639 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 NEK8Q86SG6 692 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 NOSTRINQ8IVI9 506 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 TTC30BQ8N4P2 665 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms