RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PSMD10O75832 226 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 PTPREP23469 700 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ATP2C1P98194 919 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 SAPCD2Q86UD0 394 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ZDHHC14Q8IZN3 488 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 RCCD1A6NED2 376 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 FOXD4L6Q3SYB3 417 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 C9orf131Q5VYM1 1079 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 FOXD4L3Q6VB84 417 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 PNMA1Q8ND90 353 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 XPNPEP1Q9NQW7 623 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 KBTBD4Q9NVX7 518 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 AKAP2Q9Y2D5 859 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 MIA3Q5JRA6 1907 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 USP27XA6NNY8 438 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 CC2D2BQ6DHV5 1058 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 SPRED2Q7Z698 418 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 UBE2Q1Q7Z7E8 422 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 SH2D3AQ9BRG2 576 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 USP40Q9NVE5 1235 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 NIPBLQ6KC79 2804 aaeCLIP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 MYADML2A6NDP7 307 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TTC39AQ5SRH9 613 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 FOXD4L5Q5VV16 416 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 WDR59Q6PJI9 974 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 FOXD4L4Q8WXT5 416 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 SERPINB13Q9UIV8 391 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 PARP3Q9Y6F1 533 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TMEM232C9JQI7 657 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 PIK3CDO00329 1044 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 SNAI1O95863 264 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TBX2Q13207 712 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 QRICH1Q2TAL8 776 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 NAP1L5Q96NT1 182 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TMEM30AQ9NV96 361 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TCP10L2B9ZVM9 353 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TLR2O60603 784 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 HMMRO75330 724 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 SMYD4Q8IYR2 804 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 CCDC155Q8N6L0 562 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 KCTD10Q9H3F6 313 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 POLR3EQ9NVU0 708 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 GGA3Q9NZ52 723 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 TFR2Q9UP52 801 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 ZNF652Q9Y2D9 606 aa6.63□□□□□ -1.35
TOPBP1-201ENST00000260810 RSPH10B2B2RC85 870 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 GRIN3BO60391 1043 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 RSPH10BP0C881 870 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 KCNA2P16389 499 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 SOX10P56693 466 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 MAP1SQ66K74 1059 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 MTA3Q9BTC8 594 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 MCM9Q9NXL9 1143 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 ANKIB1Q9P2G1 1089 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 MCCP23508 829 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 SLC12A3P55017 1021 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 FAM182AQ5T1J6 154 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 LRRC55Q6ZSA7 311 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 MICU3Q86XE3 530 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 DNAAF5Q86Y56 855 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 HOXD8P13378 290 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 FECHP22830 423 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 SLC39A14Q15043 492 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 C17orf53Q8N3J3 647 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 ZNF507Q8TCN5 953 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 V9GY48 417 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 NFASCO94856 1347 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 H0YIN7 160 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 LDHBP07195 334 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 UQCRFS1P1P0C7P4 283 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 STAT3P40763 770 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 NAB2Q15742 525 aa6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 CRELD2Q6UXH1 353 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-201ENST00000260810 NPHP3-ACAD11A0A0J9YXS1 232 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 TGFB1I1O43294 461 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 TMEM119Q4V9L6 283 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 GSTCDQ8NEC7 633 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 ANKRD2Q9GZV1 360 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 SEMA6BQ9H3T3 888 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 UPF2Q9HAU5 1272 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 PDGFCQ9NRA1 345 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 ZFYP08048 801 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 BCRP11274 1271 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 IGHMBP2P38935 993 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 UBAP2Q5T6F2 1119 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 KAT2BQ92831 832 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 U3KPZ7 1027 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 NUP205Q92621 2012 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 ENTPD3O75355 529 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 ATG7O95352 703 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 CIITAP33076 1130 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 NPLOC4Q8TAT6 608 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 ANP32EQ9BTT0 268 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 CSRNP2Q9H175 543 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 VPS33BQ9H267 617 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 SIX2Q9NPC8 291 aa6.61□□□□□ -1.35
TOPBP1-201ENST00000260810 A0A1B0GVL5 298 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms