RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TFAP4Q01664 338 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PDXDC2PQ6P474 469 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 TMEM179Q6ZVK1 233 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 BEST2Q8NFU1 509 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 OR6J1Q8NGC5 347 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 TSC1Q92574 1164 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 APPBP2Q92624 585 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 MCCC1Q96RQ3 725 aaPredicted RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 TRAIPQ9BWF2 469 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 C2orf40Q9H1Z8 148 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ATP6V0A4Q9HBG4 840 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 STARD7Q9NQZ5 370 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 SH3BP1Q9Y3L3 701 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CFAP74Q9C0B2 1584 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 MED7O43513 233 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 SYNCRIPO60506 623 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 PCCAP05165 728 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 URODP06132 367 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 PYGLP06737 847 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 HNRNPH2P55795 449 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 PLD1Q13393 1074 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 EIF4A2Q14240 407 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 DCAF17Q5H9S7 520 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 CYP26C1Q6V0L0 522 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TMTC1Q8IUR5 882 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TRIM48Q8IWZ4 208 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ZSCAN18Q8TBC5 510 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 NSUN6Q8TEA1 469 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 SOCS4Q8WXH5 440 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 PRIMPOLQ96LW4 560 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TSSK1BQ9BXA7 367 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ELP3Q9H9T3 547 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 RPRD1BQ9NQG5 326 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 LRWD1Q9UFC0 647 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ZFYVE9O95405 1425 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 MROH7Q68CQ1 1323 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 IGSF1Q8N6C5 1336 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 KIAA0232Q92628 1395 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 SUPT6HQ7KZ85 1726 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 RSPH10B2B2RC85 870 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 H7C4K7 107 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 POLR3GO15318 223 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 SPOPO43791 374 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 HUS1O60921 280 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TADA2AO75478 443 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ATP1A1P05023 1023 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 RSPH10BP0C881 870 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 HSPA8P11142 646 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 KPNA1P52294 538 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 AK2P54819 239 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TBC1D9Q6ZT07 1266 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 RAB44Q7Z6P3 723 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 IFNL1Q8IU54 200 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TPH2Q8IWU9 490 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 PPP4R1Q8TF05 950 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 SH3KBP1Q96B97 665 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 FAM149B1Q96BN6 582 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ASIC4Q96FT7 647 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 LRRC46Q96FV0 321 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ACAD9Q9H845 621 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 GDPD2Q9HCC8 539 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 FEM1BQ9UK73 627 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 KANSL1LA0AUZ9 987 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 UBXN8O00124 270 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ZNF197O14709 1029 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 RGL2O15211 777 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ECE2O60344 883 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 PPFIA4O75335 1185 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 STAM2O75886 525 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 UPP2O95045 317 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TTLL1O95922 423 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 APOEP02649 317 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 A1BGP04217 495 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 KPNA2P52292 529 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 MXRA7P84157 204 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 ELAVL2Q12926 359 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 RPS6KA2Q15349 733 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 KIAA1755Q5JYT7 1200 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 SLFN12LQ6IEE8 588 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 STYK1Q6J9G0 422 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 RNF207Q6ZRF8 634 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 SPATA2LQ8IUW3 424 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 ZBTB38Q8NAP3 1195 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 SNX29Q8TEQ0 813 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 C16orf45Q96MC5 204 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 GPR101Q96P66 508 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 EYA1Q99502 592 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 SLF1Q9BQI6 1058 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 IRF2BPLQ9H1B7 796 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 DDX19AQ9NUU7 478 aaKnown RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 FEZ2Q9UHY8 353 aaPredicted RBP4.42□□□□□ -1.7
RNF38-201ENST00000259605 PALD1Q9ULE6 856 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 NCKAP1Q9Y2A7 1128 aa4.42□□□□□ -1.7
RNF38-201ENST00000259605 TMEM88BA6NKF7 163 aa4.41□□□□□ -1.7
RNF38-201ENST00000259605 SART1O43290 800 aaKnown RBP4.41□□□□□ -1.7
RNF38-201ENST00000259605 NDUFS2O75306 463 aa4.41□□□□□ -1.7
RNF38-201ENST00000259605 CABYRO75952 493 aa4.41□□□□□ -1.7
RNF38-201ENST00000259605 HSPD1P10809 573 aaKnown RBP4.41□□□□□ -1.7
RNF38-201ENST00000259605 MNAT1P51948 309 aa4.41□□□□□ -1.7
RNF38-201ENST00000259605 COPB1P53618 953 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms