RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 NRAPQ86VF7 1730 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
MSI1-201ENST00000257552 RASSF10A6NK89 507 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 TACC1O75410 805 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 DYNLL1P63167 89 aaKnown RBP16.4■□□□□ 0.22
MSI1-201ENST00000257552 MEA1Q16626 185 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
MSI1-201ENST00000257552 FAM212AQ96EL1 285 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 STIM2Q9P246 746 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 SUFUQ9UMX1 484 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 A0A1W2PQC6 194 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 PP2D1A8MPX8 630 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 NKRFO15226 690 aaKnown RBP eCLIP16.4■□□□□ 0.22
MSI1-201ENST00000257552 FAM153BP0C7A2 387 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 LSP1P33241 339 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 VAV2P52735 878 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 EVX2Q03828 476 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 IFT88Q13099 833 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 FAM153CQ494X1 144 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 HAUS3Q68CZ6 603 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 MS4A14Q96JA4 679 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 OSBPL9Q96SU4 736 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 FAM153AQ9UHL3 310 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 NFU1Q9UMS0 254 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
MSI1-201ENST00000257552 BMP15O95972 392 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 MMP14P50281 582 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 DNM2P50570 870 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 NAA35Q5VZE5 725 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 C8orf74Q6P047 294 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 CSGALNACT2Q8N6G5 542 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 IFIH1Q9BYX4 1025 aaKnown RBP16.39■□□□□ 0.21
MSI1-201ENST00000257552 RBM12Q9NTZ6 932 aaKnown RBP16.39■□□□□ 0.21
MSI1-201ENST00000257552 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
MSI1-201ENST00000257552 CARSP49589 748 aaKnown RBP16.39■□□□□ 0.21
MSI1-201ENST00000257552 NAP1L1P55209 391 aaKnown RBP16.39■□□□□ 0.21
MSI1-201ENST00000257552 SKOR1P84550 965 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
MSI1-201ENST00000257552 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
MSI1-201ENST00000257552 PDS5AQ29RF7 1337 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 ERCC3P19447 782 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 ACTN3Q08043 901 aaPredicted RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 CFAP58Q5T655 872 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 ALS2CLQ60I27 953 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 GIMAP7Q8NHV1 300 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 GPR101Q96P66 508 aaPredicted RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 SSBP05455 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
MSI1-201ENST00000257552 SRGNP10124 158 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 MTIF2P46199 727 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 ZBED6P86452 979 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 EMBQ6PCB8 327 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 FAM84BQ96KN1 310 aaPredicted RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 SPEF2Q9C093 1822 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 HPDP32754 393 aaPredicted RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 NLRP5P59047 1200 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 CCDC170Q8IYT3 715 aa16.38■□□□□ 0.21
MSI1-201ENST00000257552 ZNF473Q8WTR7 871 aaKnown RBP16.38■□□□□ 0.21
MSI1-201ENST00000257552 ZNF233A6NK53 670 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 PSMA7O14818 248 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 BUB1O43683 1085 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 GLI1P08151 1106 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 EPB41P11171 864 aaKnown RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 PAFAH1B1P43034 410 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 HDLBPQ00341 1268 aaKnown RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 NPY5RQ15761 445 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 KCTD19Q17RG1 926 aaPredicted RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 TTYH3Q9C0H2 523 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 PCDHA13Q9Y5I0 950 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 FSBPO95073 299 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 GUCY2DQ02846 1103 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 ZKSCAN4Q969J2 545 aaPredicted RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 EPB41L5Q9HCM4 733 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 PPANQ9NQ55 473 aaKnown RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
MSI1-201ENST00000257552 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 WNK3Q9BYP7 1800 aa16.37■□□□□ 0.21
MSI1-201ENST00000257552 AKR1B10O60218 316 aa16.36■□□□□ 0.21
MSI1-201ENST00000257552 RFC4P35249 363 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms