RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 FUT2Q10981 343 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 NPY5RQ15761 445 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 CCDC40Q4G0X9 1142 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 KCNV1Q6PIU1 500 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 CACNA2D4Q7Z3S7 1137 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 OR2W6PQ8NHA6 318 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 TMEM60Q9H2L4 133 aa12.93□□□□□ -0.34
VRTN-201ENST00000256362 PACSIN2Q9UNF0 486 aaPredicted RBP12.93□□□□□ -0.34
VRTN-201ENST00000256362 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
VRTN-201ENST00000256362 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 KIF4AO95239 1232 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 TUBBP07437 444 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 CLTAP09496 248 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 GCKP35557 465 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 NEDD9Q14511 834 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 TCP11Q8WWU5 503 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 HAUS4Q9H6D7 363 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 ECM29Q5VYK3 1845 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 ATP2C1P98194 919 aaPredicted RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 MSL1Q68DK7 614 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 SH3RF1Q7Z6J0 888 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 ZNF384Q8TF68 577 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 IFIH1Q9BYX4 1025 aaKnown RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 NLRC4Q9NPP4 1024 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 PLEKP08567 350 aaPredicted RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 TSEN2Q8NCE0 465 aaKnown RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 RNPC3Q96LT9 517 aaKnown RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
VRTN-201ENST00000256362 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 CNTNAP5Q8WYK1 1306 aa12.92□□□□□ -0.34
VRTN-201ENST00000256362 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 PPP1R7Q15435 360 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 NAIF1Q69YI7 327 aaPredicted RBP12.91□□□□□ -0.34
VRTN-201ENST00000256362 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 MICAL1Q8TDZ2 1067 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
VRTN-201ENST00000256362 RIOK1Q9BRS2 568 aaKnown RBP12.91□□□□□ -0.34
VRTN-201ENST00000256362 DCCP43146 1447 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 FTCDO95954 541 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 BIRC2Q13490 618 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
VRTN-201ENST00000256362 GPR101Q96P66 508 aaPredicted RBP12.91□□□□□ -0.34
VRTN-201ENST00000256362 KRT12Q99456 494 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 SELENOSQ9BQE4 189 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 ZHX3Q9H4I2 956 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 KLC4Q9NSK0 619 aa12.91□□□□□ -0.34
VRTN-201ENST00000256362 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 ELF1P32519 619 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 TFAP4Q01664 338 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 MECOMQ03112 1051 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 TUBB2AQ13885 445 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 LETM2Q2VYF4 491 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 ALS2CR12Q96Q35 445 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 TUBB2BQ9BVA1 445 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 FCER1AP12319 257 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 TMOD1P28289 359 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 PRPF4BQ13523 1007 aaKnown RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 ZNF658Q5TYW1 1059 aaPredicted RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 BUB1BO60566 1050 aaPredicted RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 NR1D1P20393 614 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 IL6STP40189 918 aaPredicted RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 ASIC1P78348 528 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 RASSF7Q02833 373 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 SPAG1Q07617 926 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 IRF2BP1Q8IU81 584 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 ZIM3Q96PE6 472 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
VRTN-201ENST00000256362 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
VRTN-201ENST00000256362 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
VRTN-201ENST00000256362 HERVK_113P62684 666 aa12.89□□□□□ -0.35
VRTN-201ENST00000256362 DYMQ7RTS9 669 aa12.89□□□□□ -0.35
VRTN-201ENST00000256362 ADAT2Q7Z6V5 191 aaKnown RBP12.89□□□□□ -0.35
VRTN-201ENST00000256362 BLIDQ8IZY5 108 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms