RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CCNG1P51959 295 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 SESN3P58005 492 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 SGSM1Q2NKQ1 1148 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 KBTBD12Q3ZCT8 623 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
CCNA1-201ENST00000255465 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 LCA5Q86VQ0 697 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 FAM84BQ96KN1 310 aaPredicted RBP13.13□□□□□ -0.31
CCNA1-201ENST00000255465 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 YIPF3Q9GZM5 350 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 IFNKQ9P0W0 207 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 ABCF2Q9UG63 623 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
CCNA1-201ENST00000255465 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 VIL1P09327 827 aaKnown RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 PSMC4P43686 418 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 GYG1P46976 350 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 SCNN1DP51172 638 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 TSNAXIP1Q2TAA8 658 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 OGFOD1Q8N543 542 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 SMYD1Q8NB12 490 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 POLR3CQ9BUI4 534 aaPredicted RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 KIF5CO60282 957 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ZNF202O95125 648 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ATP6V1G2O95670 118 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ALDH3A1P30838 453 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 PSMD7P51665 324 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 PDE1AP54750 535 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 TFCP2Q12800 502 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 RNF187Q5TA31 235 aaPredicted RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 NAA35Q5VZE5 725 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ARMC3Q5W041 872 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 TMEM139Q8IV31 216 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 LPIN2Q92539 896 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 CIDEBQ9UHD4 219 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
CCNA1-201ENST00000255465 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
CCNA1-201ENST00000255465 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
CCNA1-201ENST00000255465 F8VZ95 297 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 SMIM24O75264 130 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 SLC5A1P13866 664 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 IL1R1P14778 569 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 ATP4AP20648 1035 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 GGCXP38435 758 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 USP14P54578 494 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 AK2P54819 239 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 MYBPC3Q14896 1274 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 E2F5Q15329 346 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
CCNA1-201ENST00000255465 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 APBB1IPQ7Z5R6 666 aaPredicted RBP13.11□□□□□ -0.31
CCNA1-201ENST00000255465 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
CCNA1-201ENST00000255465 SUGCTQ9HAC7 445 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 GPRC5DQ9NZD1 345 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 WDR35Q9P2L0 1181 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
CCNA1-201ENST00000255465 SAMM50Q9Y512 469 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 ASB3Q9Y575 518 aa13.11□□□□□ -0.31
CCNA1-201ENST00000255465 POLR2AP24928 1970 aaKnown RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 CEP104O60308 925 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 FAM107AO95990 144 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 GSTA1P08263 222 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 EPS15P42566 896 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 MRPS35P82673 323 aaKnown RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 Q4G0T1 1027 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 CCDC92Q53HC0 331 aaPredicted RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 CAVIN4Q5BKX8 364 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 KDM7AQ6ZMT4 941 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 VSTM4Q8IW00 320 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms