RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 PIK3CDO00329 1044 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 GCFC2P16383 781 aaKnown RBP19.54■□□□□ 0.72
PCCB-201ENST00000251654 LMOD1P29536 600 aaPredicted RBP19.54■□□□□ 0.72
PCCB-201ENST00000251654 TRAF1Q13077 416 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 MTMR2Q13614 643 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 CALCRLQ16602 461 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 MCTP2Q6DN12 878 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 KLRG1Q96E93 195 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 CCDC34Q96HJ3 373 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 WDR18Q9BV38 432 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 MAN1B1Q9UKM7 699 aa19.54■□□□□ 0.72
PCCB-201ENST00000251654 NAALADL2Q58DX5 795 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 CCDC174Q6PII3 467 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 ILDR2Q71H61 639 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 TEX2Q8IWB9 1127 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 AOPEPQ8N6M6 819 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 SMARCE1Q969G3 411 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 MTRQ99707 1265 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 DDX25Q9UHL0 483 aaKnown RBP19.53■□□□□ 0.72
PCCB-201ENST00000251654 PTPRAP18433 802 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 UBA7P41226 1012 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 AFMP43652 599 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 FXR2P51116 673 aaKnown RBP eCLIP19.53■□□□□ 0.722e-7■■□□□ 12.4
PCCB-201ENST00000251654 USP11P51784 963 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
PCCB-201ENST00000251654 CYP3A7-CYP3A51PA0A087WV96 503 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 GOLGA6L19H0YKK7 550 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 FOSP01100 380 aaPredicted RBP19.52■□□□□ 0.72
PCCB-201ENST00000251654 VCAM1P19320 739 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 CYP3A7P24462 503 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 TECP42680 631 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 TXKP42681 527 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 DPYDQ12882 1025 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 SPP2Q13103 211 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 MORC3Q14149 939 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 TRIML1Q8N9V2 468 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 TRIM44Q96DX7 344 aaPredicted RBP19.52■□□□□ 0.72
PCCB-201ENST00000251654 MBOAT7Q96N66 472 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 NAP1L4Q99733 375 aaKnown RBP19.52■□□□□ 0.72
PCCB-201ENST00000251654 SLF1Q9BQI6 1058 aa19.52■□□□□ 0.72
PCCB-201ENST00000251654 ZNF536O15090 1300 aa19.52■□□□□ 0.71
PCCB-201ENST00000251654 OTOFQ9HC10 1997 aa19.52■□□□□ 0.71
PCCB-201ENST00000251654 RLFQ13129 1914 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 BECN2A8MW95 431 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 CASP1P29466 404 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 HOXA13P31271 388 aaPredicted RBP19.51■□□□□ 0.71
PCCB-201ENST00000251654 SREBF1P36956 1147 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 ARHGAP4P98171 946 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 MOXD1Q6UVY6 613 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 PRPF38AQ8NAV1 312 aaKnown RBP19.51■□□□□ 0.71
PCCB-201ENST00000251654 LRRC15Q8TF66 581 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 HAS1Q92839 578 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 MMTAG2Q9BU76 263 aaKnown RBP19.51■□□□□ 0.71
PCCB-201ENST00000251654 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 SPDYE3A6NKU9 549 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 STAT6P42226 847 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 USP14P54578 494 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 BACE1P56817 501 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 ZNF280CQ8ND82 737 aa19.51■□□□□ 0.71
PCCB-201ENST00000251654 SMC2O95347 1197 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 ICAM1P05362 532 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 NCAPHQ15003 741 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 NOL9Q5SY16 702 aaKnown RBP19.5■□□□□ 0.71
PCCB-201ENST00000251654 SAMD1Q6SPF0 538 aaPredicted RBP19.5■□□□□ 0.71
PCCB-201ENST00000251654 SARM1Q6SZW1 724 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 CABP7Q86V35 215 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 LDHDQ86WU2 507 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.5■□□□□ 0.71
PCCB-201ENST00000251654 STAMQ92783 540 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 L3MBTL3Q96JM7 780 aaPredicted RBP19.5■□□□□ 0.71
PCCB-201ENST00000251654 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 KCNMB3Q9NPA1 279 aa19.5■□□□□ 0.71
PCCB-201ENST00000251654 WDR90Q96KV7 1748 aa19.49■□□□□ 0.71
PCCB-201ENST00000251654 DLK2Q6UY11 383 aa19.49■□□□□ 0.71
PCCB-201ENST00000251654 GSDMAQ96QA5 445 aa19.49■□□□□ 0.71
PCCB-201ENST00000251654 TANGO6Q9C0B7 1094 aa19.49■□□□□ 0.71
PCCB-201ENST00000251654 TTC12Q9H892 705 aaPredicted RBP19.49■□□□□ 0.71
PCCB-201ENST00000251654 ABCB11O95342 1321 aa19.49■□□□□ 0.71
PCCB-201ENST00000251654 RBBP6Q7Z6E9 1792 aaKnown RBP19.49■□□□□ 0.71
PCCB-201ENST00000251654 IKBKBO14920 756 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 PDIA5Q14554 519 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 TMEM266Q2M3C6 531 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 HS1BP3Q53T59 392 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 RRAGBQ5VZM2 374 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 PLA2G4DQ86XP0 818 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 RASSF8Q8NHQ8 419 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 TBC1D5Q92609 795 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 LENG9Q96B70 501 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 SLC38A10Q9HBR0 1119 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 LRWD1Q9UFC0 647 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 CCDC39Q9UFE4 941 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
PCCB-201ENST00000251654 ZHX2Q9Y6X8 837 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 PTPRFP10586 1907 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 POTEMA6NI47 508 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 ADM5C9JUS6 153 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 GTPBP6O43824 516 aaPredicted RBP19.48■□□□□ 0.71
PCCB-201ENST00000251654 CFBP00751 764 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms