RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 CREBRFQ8IUR6 639 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 GIMAP8Q8ND71 665 aaPredicted RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 NOC3LQ8WTT2 800 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 MTMR9Q96QG7 549 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 MAPK8IP1Q9UQF2 711 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 PCDHAC2Q9Y5I4 1007 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 BICDL2A1A5D9 508 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 TDP2O95551 362 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 CLK2P49760 499 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 COPB1P53618 953 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 PDE4DQ08499 809 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 EZH2Q15910 746 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 UBE2SQ16763 222 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 KRT79Q5XKE5 535 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 CNNM4Q6P4Q7 775 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 SV2BQ7L1I2 683 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 TMEM139Q8IV31 216 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 CCDC51Q96ER9 411 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 C7orf25Q9BPX7 421 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 TRIM9Q9C026 710 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 LRRC27Q9C0I9 530 aa16.98■□□□□ 0.31
DDX49-201ENST00000247003 DDX25Q9UHL0 483 aaKnown RBP16.98■□□□□ 0.31
DDX49-201ENST00000247003 ATRNL1Q5VV63 1379 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 SLC37A4O43826 429 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 KLRC4O43908 158 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 PPP1R11O60927 126 aaPredicted RBP16.97■□□□□ 0.31
DDX49-201ENST00000247003 BAG6P46379 1132 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 PDIA5Q14554 519 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 SYT10Q6XYQ8 523 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 DHTKD1Q96HY7 919 aaPredicted RBP16.97■□□□□ 0.31
DDX49-201ENST00000247003 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 TDRD3Q9H7E2 651 aaKnown RBP16.97■□□□□ 0.31
DDX49-201ENST00000247003 PPP2R2CQ9Y2T4 447 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 PHLPP2Q6ZVD8 1323 aa16.97■□□□□ 0.31
DDX49-201ENST00000247003 EEF1GP26641 437 aaKnown RBP16.96■□□□□ 0.31
DDX49-201ENST00000247003 PBX1P40424 430 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.31
DDX49-201ENST00000247003 SEPT2Q15019 361 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
DDX49-201ENST00000247003 RBM26Q5T8P6 1007 aaKnown RBP16.96■□□□□ 0.31
DDX49-201ENST00000247003 MCTP2Q6DN12 878 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 SNX29Q8TEQ0 813 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 C7orf43Q8WVR3 580 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 TSC1Q92574 1164 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 PSME4Q14997 1843 aa16.96■□□□□ 0.31
DDX49-201ENST00000247003 LRRC10BA6NIK2 292 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 MFAP3LO75121 409 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 COBLO75128 1261 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 ETF1P62495 437 aaKnown RBP16.96■□□□□ 0.3
DDX49-201ENST00000247003 RBL2Q08999 1139 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 QRICH1Q2TAL8 776 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 CCDC93Q567U6 631 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 GMCL1P1Q8NEA9 526 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 LARP4BQ92615 738 aaKnown RBP16.96■□□□□ 0.3
DDX49-201ENST00000247003 CSRNP1Q96S65 589 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 VPS16Q9H269 839 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 TAB2Q9NYJ8 693 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 HDAC9Q9UKV0 1011 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.3
DDX49-201ENST00000247003 C21orf2O43822 256 aa16.95■□□□□ 0.3
DDX49-201ENST00000247003 GDF11O95390 407 aa16.95■□□□□ 0.3
DDX49-201ENST00000247003 HOXA7P31268 230 aaPredicted RBP16.95■□□□□ 0.3
DDX49-201ENST00000247003 MMTAG2Q9BU76 263 aaKnown RBP16.95■□□□□ 0.3
DDX49-201ENST00000247003 KDM3AQ9Y4C1 1321 aa16.95■□□□□ 0.3
DDX49-201ENST00000247003 TRIM49BA6NDI0 452 aa16.94■□□□□ 0.3
DDX49-201ENST00000247003 SLU7O95391 586 aaKnown RBP16.94■□□□□ 0.3
DDX49-201ENST00000247003 CCDC175P0C221 793 aa16.94■□□□□ 0.3
DDX49-201ENST00000247003 AP3B2Q13367 1082 aa16.94■□□□□ 0.3
DDX49-201ENST00000247003 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
DDX49-201ENST00000247003 CPLX3Q8WVH0 158 aa16.94■□□□□ 0.3
DDX49-201ENST00000247003 GMCL1Q96IK5 515 aa16.94■□□□□ 0.3
DDX49-201ENST00000247003 POTEMA6NI47 508 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 F5H6K3 240 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 PES1O00541 588 aaKnown RBP16.93■□□□□ 0.3
DDX49-201ENST00000247003 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 UBXN1Q04323 297 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 KLRC3Q07444 240 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 GRB10Q13322 594 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 CSGALNACT2Q8N6G5 542 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 LRRC15Q8TF66 581 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 P2RX5Q93086 422 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 NUP88Q99567 741 aaPredicted RBP16.93■□□□□ 0.3
DDX49-201ENST00000247003 AMNQ9BXJ7 453 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 DNAI1Q9UI46 699 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
DDX49-201ENST00000247003 CCNE1P24864 410 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 CASP14P31944 242 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 REXO1L1PQ8IX06 675 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
DDX49-201ENST00000247003 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
DDX49-201ENST00000247003 SYNPO2Q9UMS6 1093 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms