RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NUP58Q9BVL2 599 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 HAUS4Q9H6D7 363 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 USP17L5A8MUK1 530 aa24.2■■□□□ 1.46
SH2D3A-201ENST00000245908 LONRF2Q1L5Z9 754 aa24.2■■□□□ 1.46
SH2D3A-201ENST00000245908 TBC1D22AQ8WUA7 517 aa24.2■■□□□ 1.46
SH2D3A-201ENST00000245908 RBM17Q96I25 401 aaKnown RBP24.2■■□□□ 1.46
SH2D3A-201ENST00000245908 CNOT6LQ96LI5 555 aaKnown RBP24.2■■□□□ 1.46
SH2D3A-201ENST00000245908 VAT1LQ9HCJ6 419 aa24.2■■□□□ 1.46
SH2D3A-201ENST00000245908 ERICH4A6NGS2 130 aa24.19■■□□□ 1.46
SH2D3A-201ENST00000245908 ZNF662Q6ZS27 426 aa24.19■■□□□ 1.46
SH2D3A-201ENST00000245908 POTEDQ86YR6 584 aa24.19■■□□□ 1.46
SH2D3A-201ENST00000245908 CALML4Q96GE6 196 aa24.19■■□□□ 1.46
SH2D3A-201ENST00000245908 BIN2Q9UBW5 565 aaPredicted RBP24.19■■□□□ 1.46
SH2D3A-201ENST00000245908 MTMR9Q96QG7 549 aa24.19■■□□□ 1.46
SH2D3A-201ENST00000245908 VGLL3A8MV65 326 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 PDHBP11177 359 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 FCER1AP12319 257 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 HERVK_113P62684 666 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 CNNM4Q6P4Q7 775 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 UBA5Q9GZZ9 404 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 MYO6Q9UM54 1294 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 CTAGE15A4D2H0 777 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 RASSF10A6NK89 507 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 PSMD14O00487 310 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 CTAGE8P0CG41 777 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 ST5P78524 1137 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 CTAGE6Q86UF2 777 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 CTAGE4Q8IX94 777 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 TMEM260Q9NX78 707 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 TRIM10Q9UDY6 481 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 GUCA1BQ9UMX6 200 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 UBR3Q6ZT12 1888 aa24.18■■□□□ 1.46
SH2D3A-201ENST00000245908 TBC1D8BQ0IIM8 1120 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 SMC1AQ14683 1233 aaKnown RBP24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 ZSCAN29Q8IWY8 852 aaPredicted RBP24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 PNKPQ96T60 521 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 USP21Q9UK80 565 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 LTBP1Q14766 1721 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 MAP2K7O14733 419 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 BBOX1O75936 387 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 TFRCP02786 760 aaKnown RBP24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 FXR2P51116 673 aaKnown RBP eCLIP24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 KRT83P78385 493 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 ZBED6P86452 979 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 GRB10Q13322 594 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 ASPRV1Q53RT3 343 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 MIIPQ5JXC2 388 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 KIAA0895Q8NCT3 520 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 TBC1D16Q8TBP0 767 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 STK17AQ9UEE5 414 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 POLLQ9UGP5 575 aa24.17■■□□□ 1.46
SH2D3A-201ENST00000245908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 TRIM21P19474 475 aaKnown RBP24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 MTIF2P46199 727 aaKnown RBP24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 FIGNQ5HY92 759 aa24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 ERGIC2Q96RQ1 377 aa24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 BLOC1S4Q9NUP1 217 aa24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 AGPAT5Q9NUQ2 364 aa24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 MTMR4Q9NYA4 1195 aa24.16■■□□□ 1.46
SH2D3A-201ENST00000245908 CAPN2P17655 700 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 OAS2P29728 719 aaKnown RBP24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 TXKP42681 527 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 CALCRLQ16602 461 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 BEND6Q5SZJ8 279 aaPredicted RBP24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 SV2BQ7L1I2 683 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 DAGLAQ9Y4D2 1042 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 LRRC37AA6NMS7 1700 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 FRMPD2Q68DX3 1309 aaPredicted RBP24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 SERPINB2P05120 415 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 SNHG28P0DPA3 235 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 GYS1P13807 737 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 CYLC1P35663 651 aaPredicted RBP24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 ADCY7P51828 1080 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 GABPAQ06546 454 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 TRAPPC11Q7Z392 1133 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 NOC4LQ9BVI4 516 aaKnown RBP24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 LRRC4BQ9NT99 713 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 ZNHIT6Q9NWK9 470 aaKnown RBP24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 LRWD1Q9UFC0 647 aa24.15■■□□□ 1.46
SH2D3A-201ENST00000245908 A0A1W2PQJ5 194 aa24.14■■□□□ 1.46
SH2D3A-201ENST00000245908 CENPPQ6IPU0 288 aa24.14■■□□□ 1.46
SH2D3A-201ENST00000245908 CCDC170Q8IYT3 715 aa24.14■■□□□ 1.46
SH2D3A-201ENST00000245908 PNMA5Q96PV4 448 aa24.14■■□□□ 1.46
SH2D3A-201ENST00000245908 SEMA6BQ9H3T3 888 aa24.14■■□□□ 1.46
SH2D3A-201ENST00000245908 IGKV6D-41A0A0C4DH26 115 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 PVALEFA0A1B0GWK0 134 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 ERLIN1O75477 346 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 HOXA10P31260 410 aaPredicted RBP24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 KLK7P49862 253 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 CCDC122Q5T0U0 273 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 UNC13DQ70J99 1090 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 IQCDQ96DY2 449 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 EEF2KMTQ96G04 330 aa24.14■■□□□ 1.45
SH2D3A-201ENST00000245908 POLR3GO15318 223 aaPredicted RBP24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 EDIL3O43854 480 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 CDK17Q00537 523 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 TMEM266Q2M3C6 531 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 COA7Q96BR5 231 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 MYMKA6NI61 221 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 EIF3CLB5ME19 914 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms