RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 USP17L5A8MUK1 530 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 GDF11O95390 407 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 BMP15O95972 392 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.36
SOX9-201ENST00000245479 PRCPP42785 496 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 CORO7P57737 925 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 UBE4AQ14139 1066 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 SPATA1Q5VX52 437 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 CABP7Q86V35 215 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 PROCA1Q8NCQ7 364 aaPredicted RBP12.77□□□□□ -0.36
SOX9-201ENST00000245479 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.36
SOX9-201ENST00000245479 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.36
SOX9-201ENST00000245479 FAM212AQ96EL1 285 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.36
SOX9-201ENST00000245479 SALL1Q9NSC2 1324 aa12.77□□□□□ -0.36
SOX9-201ENST00000245479 TULP2O00295 520 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 TRAF5O00463 557 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 GGCXP38435 758 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 PDCLQ13371 301 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
SOX9-201ENST00000245479 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.37
SOX9-201ENST00000245479 KRT26Q7Z3Y9 468 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
SOX9-201ENST00000245479 SH2D3AQ9BRG2 576 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 LTN1O94822 1766 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 KRT31Q15323 416 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 SGMS1Q86VZ5 419 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 TBCKQ8TEA7 893 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.37
SOX9-201ENST00000245479 YY1AP1Q9H869 796 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 FER1L4A9Z1Z3 1794 aa12.77□□□□□ -0.37
SOX9-201ENST00000245479 NEFHP12036 1026 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 TTBK2Q6IQ55 1244 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 SNX29Q8TEQ0 813 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 TBC1D31Q96DN5 1066 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
SOX9-201ENST00000245479 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 SNCBQ16143 134 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 TMTC3Q6ZXV5 915 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 SPATS2Q86XZ4 545 aaKnown RBP12.76□□□□□ -0.37
SOX9-201ENST00000245479 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
SOX9-201ENST00000245479 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
SOX9-201ENST00000245479 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 ZRANB2O95218 330 aaKnown RBP eCLIP12.76□□□□□ -0.37
SOX9-201ENST00000245479 KIF4AO95239 1232 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 PAK2Q13177 524 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 KSR1Q8IVT5 923 aa12.76□□□□□ -0.37
SOX9-201ENST00000245479 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 GCOM1H8Y6P7 765 aaPredicted RBP12.75□□□□□ -0.37
SOX9-201ENST00000245479 CHUKO15111 745 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 LDHCP07864 332 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 MYZAPP0CAP1 466 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 PLCG1P19174 1290 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 FGFR2P21802 821 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 PPP1R7Q15435 360 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 ZRSR2Q15696 482 aaKnown RBP12.75□□□□□ -0.37
SOX9-201ENST00000245479 DCAF17Q5H9S7 520 aaPredicted RBP12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 RAD9BQ6WBX8 426 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.75□□□□□ -0.37
SOX9-201ENST00000245479 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 SUFUQ9UMX1 484 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 PCNTO95613 3336 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
SOX9-201ENST00000245479 TROAPQ12815 778 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 ZFYVE27Q5T4F4 411 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 TRIML1Q8N9V2 468 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 CEP95Q96GE4 821 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 PANX2Q96RD6 677 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 TSGA10Q9BZW7 698 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 SAMD15Q9P1V8 674 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 CDHR2Q9BYE9 1310 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 TNNC1P63316 161 aa12.75□□□□□ -0.37
SOX9-201ENST00000245479 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
SOX9-201ENST00000245479 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms