RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 ZKSCAN5Q9Y2L8 839 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 CDC42BPGQ6DT37 1551 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 ASNSP08243 561 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 CHST3Q7LGC8 479 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 CHMP6Q96FZ7 201 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 PI4KBQ9UBF8 816 aa8.09□□□□□ -1.11
MED28-201ENST00000237380 SLC39A6Q13433 755 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 RIPOR2Q9Y4F9 1068 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 PAK2Q13177 524 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 TNNI3KQ59H18 835 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 KIAA1755Q5JYT7 1200 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 NME8Q8N427 588 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 TGFBRAP1Q8WUH2 860 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 BAG1Q99933 345 aaPredicted RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 FPGT-TNNI3KV9GXZ4 949 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ABCA8O94911 1581 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 PEX26Q7Z412 305 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 RILPQ96NA2 401 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ARHGEF5Q12774 1597 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 RPAP1Q9BWH6 1393 aaPredicted RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 K7ENM7 598 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 IL6STP40189 918 aaPredicted RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 TBCCQ15814 346 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 CIAPIN1Q6FI81 312 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 LRGUKQ96M69 825 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 EFHD1Q9BUP0 239 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 STN1Q9H668 368 aaKnown RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 GPAA1O43292 621 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 RAET1EQ8TD07 263 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 NLRP1Q9C000 1473 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ANKARQ7Z5J8 1434 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 LRRIQ4A6NIV6 560 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 EVI5O60447 810 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 TYRO3Q06418 890 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 KLHL30Q0D2K2 578 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 CABP7Q86V35 215 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 RABEP2Q9H5N1 569 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 SPECC1L-ADORA2AF8WAN1 911 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 STXBP3O00186 592 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 PIK3AP1Q6ZUJ8 805 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 CCDC105Q8IYK2 499 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 MYOCDQ8IZQ8 938 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 SLITRK6Q9H5Y7 841 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 SMCO2A6NFE2 343 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 HNRNPCL2B2RXH8 293 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 HNRNPCL1O60812 293 aaKnown RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 KRT15P19012 456 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 RPS6KB1P23443 525 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 JAK3P52333 1124 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 GRIN1Q05586 938 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 THOC5Q13769 683 aaKnown RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 RPS6KA1Q15418 735 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ACAP3Q96P50 834 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 GUCA1BQ9UMX6 200 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 MED23Q9ULK4 1368 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 PRKG1Q13976 671 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ERFEQ4G0M1 354 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ANKS3Q6ZW76 656 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 SPATS2Q86XZ4 545 aaKnown RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 SECISBP2LQ93073 1101 aaKnown RBP8.08□□□□□ -1.12
MED28-201ENST00000237380 HDAC11Q96DB2 347 aa8.08□□□□□ -1.12
MED28-201ENST00000237380 ARHGDIAP52565 204 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 MED21Q13503 144 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 JADE1Q6IE81 842 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 KRT222Q8N1A0 295 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 THUMPD2Q9BTF0 503 aaKnown RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 RPF1Q9H9Y2 349 aaKnown RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 SLC38A10Q9HBR0 1119 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 DISC1Q9NRI5 854 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 TRMT1Q9NXH9 659 aaKnown RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 DENND3A2RUS2 1198 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 NOP14P78316 857 aaKnown RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 SIX6OS1Q8N1H7 587 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 NAPGQ99747 312 aaPredicted RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 SLC4A7Q9Y6M7 1214 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 RNF40O75150 1001 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 OCM2P0CE71 109 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 OCMP0CE72 109 aaPredicted RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 CC2D1AQ6P1N0 951 aaPredicted RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 PLA2G4DQ86XP0 818 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 TRIM58Q8NG06 486 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 SCYL1Q96KG9 808 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 TUBB6Q9BUF5 446 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 TRIM54Q9BYV2 358 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 C2orf40Q9H1Z8 148 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 KDM4CQ9H3R0 1056 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 CTNND2Q9UQB3 1225 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 ZNF804BA4D1E1 1349 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 LRRIQ3A6PVS8 624 aaPredicted RBP8.07□□□□□ -1.12
MED28-201ENST00000237380 BRD1O95696 1058 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 SKILP12757 684 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 TRAPPC10P48553 1259 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 DIXDC1Q155Q3 683 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 NEK8Q86SG6 692 aa8.07□□□□□ -1.12
MED28-201ENST00000237380 CYBBP04839 570 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms