RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
KNOP1-201ENST00000219837 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 CLIC6Q96NY7 704 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 GREM2Q9H772 168 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 OLA1Q9NTK5 396 aaKnown RBP12.12□□□□□ -0.47
KNOP1-201ENST00000219837 BCAP29Q9UHQ4 241 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 ANXA13P27216 316 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 TYW1Q9NV66 732 aaKnown RBP12.12□□□□□ -0.47
KNOP1-201ENST00000219837 NUB1Q9Y5A7 615 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 A0A0D9SFI3 127 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 LRGUKQ96M69 825 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 GCNAQ96QF7 691 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 HAUS8Q9BT25 410 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 KIAA1024Q9UPX6 916 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 CLIC4Q9Y696 253 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 CLGNO14967 610 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 ARHGAP6O43182 974 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 OAS2P29728 719 aaKnown RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 PTH1RQ03431 593 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 TMTC4Q5T4D3 741 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 FANCBQ8NB91 859 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 SLC12A1Q13621 1099 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF274Q96GC6 653 aaPredicted RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 SAR1BQ9Y6B6 198 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 PDE6AP16499 860 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 CDR2Q01850 454 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 TRIM58Q8NG06 486 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 HYOU1Q9Y4L1 999 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 BAG2O95816 211 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 TTLL1O95922 423 aa12.11□□□□□ -0.47
KNOP1-201ENST00000219837 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
KNOP1-201ENST00000219837 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 CLNS1AP54105 237 aaKnown RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 COG7P83436 770 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 PCIF1Q9H4Z3 704 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 PCDHA4Q9UN74 947 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 RNF40O75150 1001 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF853P0CG23 659 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 SLC16A2P36021 539 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 MYO5CQ9NQX4 1742 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 ADORA1P30542 326 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 SNAP25P60880 206 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 KIAA1841Q6NSI8 718 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 GANCQ8TET4 914 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 ACCSQ96QU6 501 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 STK25O00506 426 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 MARK3P27448 753 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 DYNLL1P63167 89 aaKnown RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 MUM1Q2TAK8 710 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
KNOP1-201ENST00000219837 CCDC51Q96ER9 411 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 CFAP36Q96G28 342 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 PCDHA1Q9Y5I3 950 aa12.1□□□□□ -0.47
KNOP1-201ENST00000219837 RNF8O76064 485 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 HSPD1P10809 573 aaKnown RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 KRT33BQ14525 404 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ODR4Q5SWX8 454 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 SLC17A8Q8NDX2 589 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 TRPC5Q9UL62 973 aaPredicted RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 YWHAGP61981 247 aaKnown RBP eCLIP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 SNX1Q13596 522 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 PDZD8Q8NEN9 1154 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 CDKL2Q92772 493 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 RASSF4Q9H2L5 321 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ASPRV1Q53RT3 343 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ADALQ6DHV7 355 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
KNOP1-201ENST00000219837 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 DESI2Q9BSY9 194 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF148Q9UQR1 794 aa12.09□□□□□ -0.47
KNOP1-201ENST00000219837 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms