RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 JAG2Q9Y219 1238 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 N4BP1O75113 896 aaKnown RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 LDHCP07864 332 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 HNRNPH3P31942 346 aaKnown RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 LETM2Q2VYF4 491 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 FKBP15Q5T1M5 1219 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 IQCEQ6IPM2 695 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 NOC4LQ9BVI4 516 aaKnown RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 FAN1Q9Y2M0 1017 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 LRRIQ3A6PVS8 624 aaPredicted RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 HOXA7P31268 230 aaPredicted RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 VAV2P52735 878 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
SRP54-201ENST00000216774 LACRTQ9GZZ8 138 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 LEMD3Q9Y2U8 911 aa14.85□□□□□ -0.03
SRP54-201ENST00000216774 ABCB11O95342 1321 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 RAD51AP2Q09MP3 1159 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 KIF5AQ12840 1032 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 FNBP4Q8N3X1 1017 aaPredicted RBP14.84□□□□□ -0.03
SRP54-201ENST00000216774 TGFBRAP1Q8WUH2 860 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 CCDC102AQ96A19 550 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
SRP54-201ENST00000216774 ESYT2A0FGR8 921 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 RCCD1A6NED2 376 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 RPS6KA4O75676 772 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 IRX5P78411 483 aaPredicted RBP14.83□□□□□ -0.03
SRP54-201ENST00000216774 SPA17Q15506 151 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 SOGA3Q5TF21 947 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 CENPPQ6IPU0 288 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 LEKR1Q6ZMV7 388 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 SLC44A5Q8NCS7 719 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 PCMTD1Q96MG8 357 aaPredicted RBP14.83□□□□□ -0.03
SRP54-201ENST00000216774 MMTAG2Q9BU76 263 aaKnown RBP14.83□□□□□ -0.03
SRP54-201ENST00000216774 STK17AQ9UEE5 414 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 SEC63Q9UGP8 760 aaKnown RBP14.83□□□□□ -0.03
SRP54-201ENST00000216774 PLAGL2Q9UPG8 496 aa14.83□□□□□ -0.03
SRP54-201ENST00000216774 ZPR1O75312 459 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 IVLP07476 585 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 GOLGA8HP0CJ92 632 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 FCER1AP12319 257 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 KLK7P49862 253 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 C16orf86Q6ZW13 317 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 KIAA0895Q8NCT3 520 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 SECISBP2LQ93073 1101 aaKnown RBP14.83□□□□□ -0.04
SRP54-201ENST00000216774 CCDC42Q96M95 316 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 TFR2Q9UP52 801 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 SNED1Q8TER0 1413 aa14.83□□□□□ -0.04
SRP54-201ENST00000216774 SBF2Q86WG5 1849 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 PVALEFA0A1B0GWK0 134 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 hCG_1984214I3L0E3 225 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 SRGAP2O75044 1071 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 CAPN2P17655 700 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 TECP42680 631 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 DIXDC1Q155Q3 683 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 SV2BQ7L1I2 683 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 ZNF804AQ7Z570 1209 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 ZNF713Q8N859 430 aaPredicted RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 TRIM58Q8NG06 486 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 EYA3Q99504 573 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 SRP68Q9UHB9 627 aaKnown RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 JRKLQ9Y4A0 524 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 USO1O60763 962 aaKnown RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 FGFR1OPO95684 399 aaKnown RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 IDEP14735 1019 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 ITIH3Q06033 890 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 VWA3BQ502W6 1294 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 C15orf52Q6ZUT6 534 aaKnown RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 CCDC84Q86UT8 332 aaPredicted RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 REXO1Q8N1G1 1221 aaKnown RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 CAGE1Q8TC20 777 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 RUBCNQ92622 972 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 RTFDC1Q9BY42 306 aaPredicted RBP14.82□□□□□ -0.04
SRP54-201ENST00000216774 SEMA6BQ9H3T3 888 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 MTMR7Q9Y216 660 aa14.82□□□□□ -0.04
SRP54-201ENST00000216774 LCA5LO95447 670 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 PRLRP16471 622 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 CDK8P49336 464 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.042e-6■■■□□ 15.9
SRP54-201ENST00000216774 FOXR2Q6PJQ5 311 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 UNC13DQ70J99 1090 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 ZNF572Q7Z3I7 529 aaPredicted RBP14.81□□□□□ -0.04
SRP54-201ENST00000216774 MAPKAPK5Q8IW41 473 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 COG1Q8WTW3 980 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 EEF2KMTQ96G04 330 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 CAPZA3Q96KX2 299 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 HPCAL4Q9UM19 191 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 NOVP48745 357 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 KCNQ4P56696 695 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 CYP27A1Q02318 531 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 CCDC70Q6NSX1 233 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 GUF1Q8N442 669 aaKnown RBP14.81□□□□□ -0.04
SRP54-201ENST00000216774 MTMR9Q96QG7 549 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms