RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 H2AFY2Q9P0M6 372 aaPredicted RBP3.75□□□□□ -1.81
NEB-201ENST00000172853 IQCA1LA6NCM1 817 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SUDS3Q9H7L9 328 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 BSDC1Q9NW68 430 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 SNAPC4Q5SXM2 1469 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MROH2BQ7Z745 1585 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 GCNT3O95395 438 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 EZH2Q15910 746 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 ASAP3Q8TDY4 903 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MEI4A8MW99 385 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 GNA14O95837 355 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 KRT14P02533 472 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TUBB4AP04350 444 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 POLR2MP0CAP2 368 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 LSP1P33241 339 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 KCNH2Q12809 1159 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 AOC3Q16853 763 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 DHX58Q96C10 678 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 AMNQ9BXJ7 453 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MYLK2Q9H1R3 596 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CTTNBP2NLQ9P2B4 639 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CCDC151A5D8V7 595 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 IRS4O14654 1257 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 FAM102BQ5T8I3 360 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 FAM76AQ8TAV0 307 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 IFT43Q96FT9 208 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 RAD18Q9NS91 495 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 PALD1Q9ULE6 856 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 PHLPP2Q6ZVD8 1323 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 ARHGAP42A6NI28 874 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TUBBP07437 444 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MXD4Q14582 209 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 UTP6Q9NYH9 597 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 THEGQ9P2T0 379 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SAP30BPQ9UHR5 308 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.74□□□□□ -1.81
NEB-201ENST00000172853 VAMP4O75379 141 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 GNG11P61952 73 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 HSP90AA5PQ58FG0 334 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 XKR9Q5GH70 373 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CXorf38Q8TB03 319 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CDHR1Q96JP9 859 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 NHEJ1Q9H9Q4 299 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 SNRKQ9NRH2 765 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 C1orf112Q9NSG2 853 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MID2Q9UJV3 735 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 KDM3AQ9Y4C1 1321 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SLC4A1P02730 911 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TFRCP02786 760 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 RALAP11233 206 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 UBASH3AP57075 661 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 PREPLQ4J6C6 727 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 SLC10A5Q5PT55 438 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SPDL1Q96EA4 605 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SUGCTQ9HAC7 445 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CTAGE9A4FU28 777 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SYNCRIPO60506 623 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 ZNF24P17028 368 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 ATP1A2P50993 1020 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MRPS15P82914 257 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 SLC12A1Q13621 1099 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CCDC189A1A4V9 331 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 GOLGA8MH3BSY2 632 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 THAP12O43422 761 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TBC1D8O95759 1140 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 HSPA6P17066 643 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 ARL4AP40617 200 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 ANKRD13DQ6ZTN6 518 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MAGEB6Q8N7X4 407 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MRPS27Q92552 414 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 EFHD1Q9BUP0 239 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MED7O43513 233 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TROVE2P10155 538 aaKnown RBP eCLIP3.74□□□□□ -1.81
NEB-201ENST00000172853 SAT1P21673 171 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 HOXA7P31268 230 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 MFSD4BQ5TF39 518 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 FAM43BQ6ZT52 329 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 VSIG1Q86XK7 387 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 SLFN12Q8IYM2 578 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 RSRC1Q96IZ7 334 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 NT5C3AQ9H0P0 336 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 EPS15L1Q9UBC2 864 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CCDC85CA6NKD9 419 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 POLGP54098 1239 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 SREBF2Q12772 1141 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 DCAF4L1Q3SXM0 396 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 KRT78Q8N1N4 520 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 CHAMP1Q96JM3 812 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TTC21BQ7Z4L5 1316 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 GAS7O60861 476 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MYBL2P10244 700 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 MX2P20592 715 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 OCRLQ01968 901 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 TP53BP2Q13625 1128 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 RRS1Q15050 365 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 TIGD7Q6NT04 549 aaPredicted RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 PODNQ7Z5L7 613 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 NLGN1Q8N2Q7 840 aa3.74□□□□□ -1.81
NEB-201ENST00000172853 LLPHQ9BRT6 129 aaKnown RBP3.74□□□□□ -1.81
NEB-201ENST00000172853 KDM4CQ9H3R0 1056 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms