RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Krt23Q99PS0 422 aa14.11□□□□□ -0.15
Trim50-202ENSMUST00000111180 Arhgef25Q9CWR0 618 aa14.11□□□□□ -0.15
Trim50-202ENSMUST00000111180 Calml3Q9D6P8 149 aa14.11□□□□□ -0.15
Trim50-202ENSMUST00000111180 Ubiad1Q9DC60 336 aa14.11□□□□□ -0.15
Trim50-202ENSMUST00000111180 PdcQ9QW08 244 aa14.11□□□□□ -0.15
Trim50-202ENSMUST00000111180 IkQ9Z1M8 557 aaKnown RBP14.11□□□□□ -0.15
Trim50-202ENSMUST00000111180 Ep400Q8CHI8 3072 aaKnown RBP14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 CatspereP0DP43 985 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Aco1P28271 889 aaKnown RBP14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Nedd1P33215 660 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Cyp2c39P56656 490 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Gm10392Q3V3I3 114 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Oxr1Q4KMM3 866 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Cyp7b1Q60991 507 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Casc1Q6TDU8 730 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Kctd3Q8BFX3 815 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Wdr24Q8CFJ9 790 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Crlf2Q8CII9 359 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Dlk2Q8K1E3 382 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Hexim1Q8R409 356 aaKnown RBP14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 BaatQ91X34 420 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Kctd10Q922M3 315 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 Ccdc81Q9D5W4 654 aa14.1□□□□□ -0.15
Trim50-202ENSMUST00000111180 A0A0U1RNP2 1173 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Skor2A7M7C7 1008 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 1700113H08RikE9Q9Q5 327 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Tpd52l1O54818 204 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 TxnP10639 105 aaKnown RBP14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 PparaP23204 468 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 GabpaQ00422 454 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Cntnap5bQ0V8T8 1292 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Plekha7Q3UIL6 1118 aaKnown RBP14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Zfp957Q3UT76 567 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Ccdc85aQ5SP85 500 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Tas2r124Q7M718 309 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 BC048507Q80ZS7 89 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Entpd3Q8BFW6 529 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Samm50Q8BGH2 469 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Tbc1d10bQ8BHL3 798 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Gprasp2Q8BUY8 826 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Snx17Q8BVL3 470 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 MslnlQ8C160 685 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Serpinb13Q8CDC0 389 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Onecut3Q8K557 490 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Sapcd2Q9D818 391 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Tjp3Q9QXY1 905 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Nr2e3Q9QXZ7 395 aa14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Acot9Q9R0X4 439 aaKnown RBP14.09□□□□□ -0.15
Trim50-202ENSMUST00000111180 Scn3aA2ASI5 1947 aa14.08□□□□□ -0.15
Trim50-202ENSMUST00000111180 Wdr33Q8K4P0 1330 aaKnown RBP14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Btnl4A2CG29 586 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tbc1d2B1AVH7 922 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Hsp90aa1P07901 733 aaKnown RBP14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Atp9bP98195 1146 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Cyp2e1Q05421 493 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Nt5c2Q3V1L4 560 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tnni3kQ5GIG6 834 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Cnga2Q62398 664 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Siglec10Q80ZE3 688 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ccdc172Q810N9 267 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Zscan22Q8BGS5 496 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Morc2bQ8C5W4 1022 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Atp5c1Q91VR2 298 aaKnown RBP14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 SrrtQ99MR6 875 aaKnown RBP14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Lmbr1Q9JIT0 490 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 Zbtb22Q9Z0G7 638 aa14.08□□□□□ -0.16
Trim50-202ENSMUST00000111180 RptorQ8K4Q0 1335 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 C87977A2A958 498 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Skint3A7TZF0 458 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm21969J3QJZ1 289 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Parp2O88554 559 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 EporP14753 507 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Trap1aP19473 224 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 CebpaP53566 359 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tmem109Q3UBX0 243 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tmem60Q8K174 133 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Kiaa1024Q8K3V7 917 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Trib2Q8K4K3 343 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Nr3c2Q8VII8 978 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ctu1Q99J10 420 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 PdhbQ9D051 359 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Xrn2Q9DBR1 951 aaKnown RBP14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Pidd1Q9ERV7 915 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Hic2Q9JLZ6 619 aaKnown RBP14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 GdaQ9R111 454 aa14.07□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm43638A0A0J9YU36 694 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ripor3A1L3T7 938 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tmem132bF7BAB2 1078 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm9857F7CXR1 130 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gucy1a2F8VQK3 730 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ppp1r9aH3BJD6 1292 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 AoahO35298 574 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Il13ra2O88786 383 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Il6stQ00560 917 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gjb4Q02738 266 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Isy1Q69ZQ2 285 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Atp1a3Q6PIC6 1013 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Nap1l4Q78ZA7 375 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Spata7Q80VP2 582 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Cyp26b1Q811W2 512 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 2527.8 ms