RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Zkscan5Q9Z1D8 819 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Gm32742A0A1B0GT42 1604 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Krt78E9Q0F0 1068 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Nedd9O35177 833 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 GalcP54818 684 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cnksr2Q80YA9 1032 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ttc27Q8CD92 847 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Proca1B0QZF7 307 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 GopcQ8BH60 463 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mei4Q8BRM6 389 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Arhgap24Q8C4V1 747 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Tex13cD3YU32 604 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Slc39a2G3X943 309 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ms4a1P19437 291 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ano9P86044 747 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mettl14Q3UIK4 456 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 D130040H23RikQ8BII3 405 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Spire2Q8K1S6 718 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Krt34Q9D646 392 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Zfp408H7BX78 710 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 FosP01101 380 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Sptlc3Q8BG54 563 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ces1Q8VCC2 565 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Eef1gQ9D8N0 437 aaKnown RBP12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cbx6Q9DBY5 414 aa12.09□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cd22P35329 862 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Atp11aP98197 1187 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 LrmpQ60664 539 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Avpr1aQ62463 423 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Gpr108Q91WD0 569 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Pcdhb15Q91Y04 786 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Akt1s1Q9D1F4 257 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 MlklQ9D2Y4 472 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Rsrc1Q9DBU6 334 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Brpf3B2KF05 1204 aaKnown RBP12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Becn2P0DM65 447 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 DSCC1Q14AI0 399 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Ccdc85aQ5SP85 500 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Dnaaf2Q8BPI1 814 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Prc1Q99K43 603 aaKnown RBP12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 4930548H24RikQ9D496 437 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Tmem2Q5FWI3 1383 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 CopeO89079 308 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Nom1Q3UFM5 854 aaKnown RBP12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 ThrspQ62264 150 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Osbpl2Q8BX94 484 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Lonp1Q8CGK3 949 aaKnown RBP12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Pcdhb12Q91Y07 789 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Klhl40Q9D783 621 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Abcb6Q9DC29 842 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Rmdn1Q9DCV4 305 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Iqgap3F8VQ29 1632 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 NeblQ0II04 452 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Defb15Q8R2I5 79 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Armc9Q9D2I5 817 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Gna14P30677 355 aa12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Tex2Q6ZPJ0 1128 aaKnown RBP12.08□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Rfc1P35601 1131 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Cacnb3P54285 484 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Evi5P97366 809 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Tom1l1Q923U0 474 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Erp44Q9D1Q6 406 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Msh6P54276 1358 aaKnown RBP12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Slc12a2P55012 1205 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Nxf2Q4ZGD8 691 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Mbd5B1AYB6 1498 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Spag7Q7TNE3 227 aaKnown RBP12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 CtsqQ91ZF4 343 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Stk38lQ7TSE6 464 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Zcchc8Q9CYA6 709 aaKnown RBP12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Gm14525B1AZA0 212 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Gm2012B1B0R1 212 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 NyxP83503 476 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Lrriq3Q14DL3 633 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Kiaa0319Q5SZV5 1081 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Gm14819Q62478 212 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Fam196bQ6GQV1 535 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Prpf3Q922U1 683 aaKnown RBP12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Alppl2P24823 529 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 PhbP67778 272 aaKnown RBP12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Krt40Q6IFX3 439 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 AbraQ8BUZ1 375 aa12.07□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Lonrf2B2RT44 518 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Slc10a4Q3UEZ8 437 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Lamc2Q61092 1191 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 WaslQ91YD9 501 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Trim66Q924W6 1242 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Dhx58Q99J87 678 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Gins2Q9D600 185 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Tsc1Q9EP53 1161 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Mageb2A2AHM0 380 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Ice2Q3UZ18 988 aaKnown RBP12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Atp2a3Q64518 1038 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 4921530L21RikQ9CQ47 274 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Atf2P16951 487 aaKnown RBP12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Rnf207Q3V3A7 635 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Ehd2Q8BH64 543 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Ppp1r37Q8BKR5 712 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Rassf4Q8CB96 322 aa12.06□□□□□ -0.48
Scn8a-203ENSMUST00000108908 Sgk1Q9WVC6 431 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms