RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TBC1D8BQ0IIM8 1120 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-233ENST00000642021 ANKS1AQ92625 1134 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 ZNF185O15231 689 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 ZMYND10O75800 440 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 TRIM21P19474 475 aaKnown RBP15.48■□□□□ 0.07
PHGDH-233ENST00000642021 DIXDC1Q155Q3 683 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 PAPD7Q5XG87 772 aaKnown RBP15.48■□□□□ 0.07
PHGDH-233ENST00000642021 DZIP1Q86YF9 867 aaKnown RBP15.48■□□□□ 0.07
PHGDH-233ENST00000642021 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 TRIM9Q9C026 710 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 NHEJ1Q9H9Q4 299 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-233ENST00000642021 MKNK2Q9HBH9 465 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 EXOC1Q9NV70 894 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 MAGEC2Q9UBF1 373 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-233ENST00000642021 STX8Q9UNK0 236 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 STRCQ7RTU9 1775 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 PDE4DQ08499 809 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 STIM1Q13586 685 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 SRP68Q9UHB9 627 aaKnown RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 PDE2AO00408 941 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 EIF3JO75822 258 aaKnown RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 CCDC178Q5BJE1 867 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 MIIPQ5JXC2 388 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 CABP7Q86V35 215 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 DAGLBQ8NCG7 672 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 CCDC148Q8NFR7 591 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 P2RX5Q93086 422 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 JAKMIP2Q96AA8 810 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 GDAP1L1Q96MZ0 367 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 NLRP3Q96P20 1036 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 LCMT1Q9UIC8 334 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 PALM3A6NDB9 673 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 ZNF263O14978 683 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 TSPY3P0CV98 308 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 TSPY8P0CW00 308 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 ACTN2P35609 894 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 LETM2Q2VYF4 491 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 KIAA1328Q86T90 577 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 RREB1Q92766 1687 aa15.47■□□□□ 0.07
PHGDH-233ENST00000642021 CNOT6LQ96LI5 555 aaKnown RBP15.47■□□□□ 0.07
PHGDH-233ENST00000642021 MYL1P05976 194 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 PLEKP08567 350 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-233ENST00000642021 CCNE1P24864 410 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 KRT26Q7Z3Y9 468 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 HINFPQ9BQA5 517 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 CDCA7Q9BWT1 371 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-233ENST00000642021 GBP3Q9H0R5 595 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 KIAA1551Q9HCM1 1747 aa15.46■□□□□ 0.07
PHGDH-233ENST00000642021 COL22A1Q8NFW1 1626 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-233ENST00000642021 IRS2Q9Y4H2 1338 aa15.46■□□□□ 0.06
PHGDH-233ENST00000642021 CCNT1O60563 726 aaKnown RBP15.46■□□□□ 0.06
PHGDH-233ENST00000642021 TM4SF1P30408 202 aa15.46■□□□□ 0.06
PHGDH-233ENST00000642021 KRT83P78385 493 aa15.46■□□□□ 0.06
PHGDH-233ENST00000642021 FOXR1Q6PIV2 292 aa15.46■□□□□ 0.06
PHGDH-233ENST00000642021 GOLGA5Q8TBA6 731 aa15.46■□□□□ 0.06
PHGDH-233ENST00000642021 MACROD2A1Z1Q3 448 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 KLRF2D3W0D1 207 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 MYBL2P10244 700 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 TECP42680 631 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 GNAQP50148 359 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 ASIC1P78348 528 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 PTF1AQ7RTS3 328 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 GPIHBP1Q8IV16 184 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 MMTAG2Q9BU76 263 aaKnown RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 COL16A1Q07092 1604 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 KRT86O43790 486 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 SYF2O95926 243 aaKnown RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 TUBBP07437 444 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 PRPHP41219 470 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 ZBED6P86452 979 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 ZNF662Q6ZS27 426 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 ZNF444Q8N0Y2 327 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 KIAA0895Q8NCT3 520 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 PCMTD1Q96MG8 357 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
PHGDH-233ENST00000642021 ANKRD2Q9GZV1 360 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 SEMA6BQ9H3T3 888 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 TCP11L1Q9NUJ3 509 aa15.45■□□□□ 0.06
PHGDH-233ENST00000642021 EIF3CLB5ME19 914 aaKnown RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 EPHB6O15197 1021 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 OR52Z1P0C646 297 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 RASA1P20936 1047 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 MTIF2P46199 727 aaKnown RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 RIN2Q8WYP3 895 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 EIF3CQ99613 913 aaKnown RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 LAD1O00515 517 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 CYLC1P35663 651 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 GALNT17Q6IS24 598 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms