RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 ZNF532Q9HCE3 1301 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 ASB14A6NK59 587 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 H3BQ06 376 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-217ENST00000641455 ST18O60284 1047 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 BCAR3O75815 825 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 MYL3P08590 195 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 SMPD1P17405 629 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-217ENST00000641455 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 TMCO2Q7Z6W1 182 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-217ENST00000641455 FBXO16Q8IX29 292 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-217ENST00000641455 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
PHGDH-217ENST00000641455 CHST13Q8NET6 341 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 ANKS1AQ92625 1134 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 MFSD14AQ96MC6 490 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-217ENST00000641455 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
PHGDH-217ENST00000641455 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 ZNF318Q5VUA4 2279 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PRKAB2O43741 272 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 NDUFB10O96000 172 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 IQCF3P0C7M6 154 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 CHMP4BP1P59074 171 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 KIAA1211Q6ZU35 1233 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 TET1Q8NFU7 2136 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PPP1R13LQ8WUF5 828 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 TGS1Q96RS0 853 aaKnown RBP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 DNAJC2Q99543 621 aaKnown RBP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 ACAD9Q9H845 621 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 SUGCTQ9HAC7 445 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PDGFCQ9NRA1 345 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 FAM50BQ9Y247 325 aa9.42□□□□□ -0.9
PHGDH-217ENST00000641455 DDX49Q9Y6V7 483 aaKnown RBP9.42□□□□□ -0.9
PHGDH-217ENST00000641455 PTPRSQ13332 1948 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 SOWAHBA6NEL2 793 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 USP17L21D6R901 530 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 F5H6K3 240 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 ATP2A1O14983 1001 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 MBD4O95243 580 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 PTPN5P54829 565 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 WDR5P61964 334 aaKnown RBP9.41□□□□□ -0.9
PHGDH-217ENST00000641455 KLRC3Q07444 240 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 BFSP2Q13515 415 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 POLA2Q14181 598 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 IQSEC1Q6DN90 963 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 FAM117BQ6P1L5 589 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 AACSQ86V21 672 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 STK11IPQ8N1F8 1099 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 FAM133AQ8N9E0 248 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 MTG1Q9BT17 334 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-217ENST00000641455 UPF3BQ9BZI7 483 aaKnown RBP9.41□□□□□ -0.9
PHGDH-217ENST00000641455 SLC38A10Q9HBR0 1119 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 RNF146Q9NTX7 359 aa9.41□□□□□ -0.9
PHGDH-217ENST00000641455 SIP14410 1827 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 ZDBF2Q9HCK1 2354 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 GOLIM4O00461 696 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 PITPNM1O00562 1244 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 CT47B1P0C2W7 299 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-217ENST00000641455 OAZ1P54368 228 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 ERVK-21P61565 698 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 DEFB103AP81534 67 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 ZP2Q05996 745 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-217ENST00000641455 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 TMEM63BQ5T3F8 832 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 C12orf60Q5U649 245 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
PHGDH-217ENST00000641455 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 PRSS33Q8NF86 280 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 SSH3Q8TE77 659 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-217ENST00000641455 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 A1CFQ9NQ94 594 aaKnown RBP9.4□□□□□ -0.9
PHGDH-217ENST00000641455 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 FEM1BQ9UK73 627 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 Q9Y3F1 56 aa9.4□□□□□ -0.9
PHGDH-217ENST00000641455 TRIP12Q14669 1992 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-217ENST00000641455 LINC01553A4QN01 128 aa9.39□□□□□ -0.91
PHGDH-217ENST00000641455 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
PHGDH-217ENST00000641455 GFRA3O60609 400 aa9.39□□□□□ -0.91
PHGDH-217ENST00000641455 ALAS1P13196 640 aa9.39□□□□□ -0.91
PHGDH-217ENST00000641455 CPT1AP50416 773 aa9.39□□□□□ -0.91
PHGDH-217ENST00000641455 ATP8B2P98198 1209 aa9.39□□□□□ -0.91
PHGDH-217ENST00000641455 PURAQ00577 322 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms