RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SCYL3Q8IZE3 742 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 TBCKQ8TEA7 893 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-215ENST00000641371 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 CCSER1Q9C0I3 900 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 CSRNP2Q9H175 543 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 RANBP17Q9H2T7 1088 aaKnown RBP11.03□□□□□ -0.64
PHGDH-215ENST00000641371 TUBE1Q9UJT0 475 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 PRR12Q9ULL5 1215 aa11.03□□□□□ -0.64
PHGDH-215ENST00000641371 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 SMTNL1A8MU46 457 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 GOLGA6L19H0YKK7 550 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 POLR2DO15514 142 aaKnown RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 SLFN14P0C7P3 912 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 NF2P35240 595 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 SLC16A2P36021 539 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 ZNF165P49910 485 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 NLRP12P59046 1061 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 LETM2Q2VYF4 491 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 HS1BP3Q53T59 392 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 USP50Q70EL3 339 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 C4orf32Q8N8J7 132 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 PRPF38AQ8NAV1 312 aaKnown RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 RBM46Q8TBY0 533 aaKnown RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 COA7Q96BR5 231 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-215ENST00000641371 C12orf42Q96LP6 360 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 CLIC6Q96NY7 704 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 CPVLQ9H3G5 476 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 GGA3Q9NZ52 723 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 SCN4AP35499 1836 aa11.02□□□□□ -0.65
PHGDH-215ENST00000641371 SHTN1A0MZ66 631 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 VWA3AA6NCI4 1184 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 BECN2A8MW95 431 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 TBX3O15119 743 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-215ENST00000641371 UBA7P41226 1012 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 ECE1P42892 770 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.654e-8■■■□□ 17.3
PHGDH-215ENST00000641371 PDIA5Q14554 519 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 POSTNQ15063 836 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 CALCRLQ16602 461 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 ANO6Q4KMQ2 910 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 FAM83BQ5T0W9 1011 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 NT5DC1Q5TFE4 455 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 MCF2L2Q86YR7 1114 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 SULF1Q8IWU6 871 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 SLFN12Q8IYM2 578 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 ACER1Q8TDN7 264 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
PHGDH-215ENST00000641371 RMND1Q9NWS8 449 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 BIN2Q9UBW5 565 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-215ENST00000641371 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
PHGDH-215ENST00000641371 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 CYP3A7-CYP3A51PA0A087WV96 503 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 UNCXA6NJT0 531 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 PPP1R11O60927 126 aaPredicted RBP11□□□□□ -0.65
PHGDH-215ENST00000641371 EGFRP00533 1210 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 CYP3A7P24462 503 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 JAG1P78504 1218 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 AMPD3Q01432 767 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 NBPF12Q5TAG4 269 aaPredicted RBP11□□□□□ -0.65
PHGDH-215ENST00000641371 C9orf131Q5VYM1 1079 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 MLKLQ8NB16 471 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 RNF214Q8ND24 703 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 ZNF280CQ8ND82 737 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 TRPM4Q8TD43 1214 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 SMARCE1Q969G3 411 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 CCDC47Q96A33 483 aaKnown RBP11□□□□□ -0.65
PHGDH-215ENST00000641371 CALML4Q96GE6 196 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 PDLIM2Q96JY6 352 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 GSDMAQ96QA5 445 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 WRNIP1Q96S55 665 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 SLF1Q9BQI6 1058 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 ANO3Q9BYT9 981 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 LRRC27Q9C0I9 530 aa11□□□□□ -0.65
PHGDH-215ENST00000641371 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
PHGDH-215ENST00000641371 GCOM1H8Y6P7 765 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-215ENST00000641371 IKBKBO14920 756 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
PHGDH-215ENST00000641371 ICAM1P05362 532 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 TPM3P06753 285 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 CYP3A4P08684 503 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 POLR2MP0CAP2 368 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 SREBF1P36956 1147 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 PPP1R2P41236 205 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 EPS15P42566 896 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 OAZ1P54368 228 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 BACE1P56817 501 aa10.99□□□□□ -0.65
PHGDH-215ENST00000641371 GHRHRQ02643 423 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms