RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ZNF536O15090 1300 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 FRMPD2Q68DX3 1309 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-231ENST00000639599 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 LAMA3Q16787 3333 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 DYNC1LI2O43237 492 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-231ENST00000639599 HDAC1Q13547 482 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-231ENST00000639599 ALX1Q15699 326 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 FSCN1Q16658 493 aaKnown RBP17.29■□□□□ 0.36
TARDBP-231ENST00000639599 PSRC1Q6PGN9 363 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-231ENST00000639599 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 FBXO16Q8IX29 292 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-231ENST00000639599 MYLIPQ8WY64 445 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 VTA1Q9NP79 307 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 GPCPD1Q9NPB8 672 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 CYP39A1Q9NYL5 469 aa17.29■□□□□ 0.36
TARDBP-231ENST00000639599 CCDC171Q6TFL3 1326 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-231ENST00000639599 ADCY6O43306 1168 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 FGAP02671 866 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 PCP11498 1178 aaKnown RBP17.28■□□□□ 0.36
TARDBP-231ENST00000639599 SLC16A2P36021 539 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 EPHB4P54760 987 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 HAND2P61296 217 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 MUM1L1Q5H9M0 696 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 CXCL17Q6UXB2 119 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 SEZ6LQ9BYH1 1024 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 LNPKQ9C0E8 428 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 RANBP17Q9H2T7 1088 aaKnown RBP17.28■□□□□ 0.36
TARDBP-231ENST00000639599 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-231ENST00000639599 GPHNQ9NQX3 736 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-231ENST00000639599 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 PLXNA1Q9UIW2 1896 aa17.28■□□□□ 0.36
TARDBP-231ENST00000639599 RAD50Q92878 1312 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 A0A0D9SFI3 127 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 B4DLN1 442 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 DNAJB2P25686 324 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
TARDBP-231ENST00000639599 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-231ENST00000639599 NMIQ13287 307 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-231ENST00000639599 AAMPQ13685 434 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-231ENST00000639599 RASGRP2Q7LDG7 609 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 ESR2Q92731 530 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.36
TARDBP-231ENST00000639599 MYH4Q9Y623 1939 aa17.27■□□□□ 0.35
TARDBP-231ENST00000639599 FOXP2O15409 715 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
TARDBP-231ENST00000639599 CSF2RAP15509 400 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 SMPD1P17405 629 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 CALML3P27482 149 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 CDK7P50613 346 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 ITGA7Q13683 1181 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 BAATQ14032 418 aaPredicted RBP17.26■□□□□ 0.35
TARDBP-231ENST00000639599 TTBK2Q6IQ55 1244 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 FAM126BQ8IXS8 530 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 TIFAQ96CG3 184 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■□□□□ 10.9
TARDBP-231ENST00000639599 KATNBL1Q9H079 304 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 HIPK3Q9H422 1215 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 DIAPH3Q9NSV4 1193 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 TCP11L1Q9NUJ3 509 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 GNEQ9Y223 722 aaKnown RBP17.26■□□□□ 0.35
TARDBP-231ENST00000639599 Q9Y3F1 56 aa17.26■□□□□ 0.35
TARDBP-231ENST00000639599 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 ZNF213O14771 459 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 ALDH5A1P51649 535 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-231ENST00000639599 PDE4DQ08499 809 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 CCDC178Q5BJE1 867 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 RNF207Q6ZRF8 634 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
TARDBP-231ENST00000639599 TTC14Q96N46 770 aa17.25■□□□□ 0.35
TARDBP-231ENST00000639599 TTYH1Q9H313 450 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-231ENST00000639599 ZNFX1Q9P2E3 1918 aaKnown RBP17.25■□□□□ 0.35
TARDBP-231ENST00000639599 LOC102724159A0A0B4J2E5 919 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 CPT1AP50416 773 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 PWP2Q15269 919 aaKnown RBP17.24■□□□□ 0.35
TARDBP-231ENST00000639599 BTNL9Q6UXG8 535 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 GAS2L1Q99501 681 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-231ENST00000639599 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 MSRAQ9UJ68 235 aa17.24■□□□□ 0.35
TARDBP-231ENST00000639599 HIP1O00291 1037 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 NFIBO00712 420 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
TARDBP-231ENST00000639599 MYL3P08590 195 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 FGRP09769 529 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 ACRP10323 421 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 PDHBP11177 359 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 CYP2C18P33260 490 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms