RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 AP3B2Q13367 1082 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
CLN6-219ENST00000637329 MRPS27Q92552 414 aaKnown RBP17.52■□□□□ 0.4
CLN6-219ENST00000637329 KIFC2Q96AC6 838 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 TMOD4Q9NZQ9 345 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 PCDHB6Q9Y5E3 794 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
CLN6-219ENST00000637329 ABCB11O95342 1321 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 PTPRFP10586 1907 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 LAD1O00515 517 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 PPATQ06203 517 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 CCDC73Q6ZRK6 1079 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 RASGRP4Q8TDF6 673 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
CLN6-219ENST00000637329 PSTPIP2Q9H939 334 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 PPP1R9AQ9ULJ8 1098 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
CLN6-219ENST00000637329 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 ICAM1P05362 532 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 FKBP1BP68106 108 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
CLN6-219ENST00000637329 PRKG1Q13976 671 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
CLN6-219ENST00000637329 NEK8Q86SG6 692 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
CLN6-219ENST00000637329 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 NAP1L4Q99733 375 aaKnown RBP17.5■□□□□ 0.39
CLN6-219ENST00000637329 TMEM63CQ9P1W3 806 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 A0A0G2JMZ2 1700 aa17.5■□□□□ 0.39
CLN6-219ENST00000637329 FAM237AA0A1B0GTK4 181 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 ADAMTS3O15072 1205 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 FLOT1O75955 427 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 POTEIP0CG38 1075 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 POTEJP0CG39 1038 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 PTPREP23469 700 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 CMA1P23946 247 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 HMGCS2P54868 508 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 FAM160A1Q05DH4 1040 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 PPIL2Q13356 520 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 CCAR1Q8IX12 1150 aaKnown RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 FBXO28Q9NVF7 368 aa17.49■□□□□ 0.39
CLN6-219ENST00000637329 FBXO2Q9UK22 296 aaPredicted RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 SRPRBQ9Y5M8 271 aaKnown RBP17.49■□□□□ 0.39
CLN6-219ENST00000637329 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 FOSP01100 380 aaPredicted RBP17.48■□□□□ 0.39
CLN6-219ENST00000637329 LIG1P18858 919 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 ZNF445P59923 1031 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 TTLL12Q14166 644 aaPredicted RBP17.48■□□□□ 0.39
CLN6-219ENST00000637329 INF2Q27J81 1249 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 USH1GQ495M9 461 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 PROCA1Q8NCQ7 364 aaPredicted RBP17.48■□□□□ 0.39
CLN6-219ENST00000637329 TBCKQ8TEA7 893 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
CLN6-219ENST00000637329 SLC38A10Q9HBR0 1119 aa17.48■□□□□ 0.39
CLN6-219ENST00000637329 BIN2Q9UBW5 565 aaPredicted RBP17.48■□□□□ 0.39
CLN6-219ENST00000637329 ABT1Q9ULW3 272 aaKnown RBP17.48■□□□□ 0.39
CLN6-219ENST00000637329 CXCL11O14625 94 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
CLN6-219ENST00000637329 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
CLN6-219ENST00000637329 PRPHP41219 470 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 OAZ1P54368 228 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 GHRHRQ02643 423 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 GSE1Q14687 1217 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 LDLRAD1Q5T700 205 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 JAKMIP3Q5VZ66 844 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 RESP18Q5W5W9 173 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 DLK2Q6UY11 383 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 SAMD3Q8N6K7 520 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 GOLPH3LQ9H4A5 285 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 DACT1Q9NYF0 836 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 KCNH4Q9UQ05 1017 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 RLFQ13129 1914 aa17.47■□□□□ 0.39
CLN6-219ENST00000637329 A0A0G2JLL6 359 aaPredicted RBP17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 WNT7AO00755 349 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 MEIS2O14770 477 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 OPLAHO14841 1288 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 ZBED4O75132 1171 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 ATP2B1P20020 1258 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 SNAP25P60880 206 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms